Marker Genes

Dataset: A general approach for detecting expressed mutations in AML cells using single cell RNA-sequencing

  • tissue: Bone marrow
  • ontology: Bone marrow
  • genotype: -
  • stage: Adult
  • treatment condition: AML
  • cell/nucleus: Cells
  • pmid: 31413257
  • subset name: all
  • total genes: 20090
  • clustering: Seurat
  • pseudotime: None
  • link:

Rows:100
dataset id cluster id cluster name cell type name sample id gene symbol entrez geneid species specific geneid
avg log fc (?)
pct 1 pct 2 p value padj
101 3 DEND (L) all PTGDS 5730 9592 3.61 0.4 0.01 1.01909511292725e-91 2.42942083970727e-87
101 3 DEND (L) all IRF7 3665 6122 2.71 0.9 0.25 4.87880424362778e-44 1.16305814363843e-39
101 3 DEND (L) all IRF8 3394 5358 2.54 0.9 0.15 3.51058213301167e-65 8.36887674688651e-61
101 3 DEND (L) all JCHAIN 3512 5713 2.48 0.98 0.06 2.86718988034436e-177 6.83509395575291e-173
101 3 DEND (L) all UGCG 7357 12524 2.3 0.9 0.07 2.41800304798784e-131 5.76427746609822e-127
101 3 DEND (L) all SERPINF1 5176 8824 2.01 0.82 0.02 7.89160696086032e-306 1.88128018339949e-301
101 3 DEND (L) all GZMB 3002 4709 2.01 0.76 0.01 0 0
101 3 DEND (L) all NIBAN3 199786 24130 2.01 0.84 0.01 0 0
101 3 DEND (L) all TCF4 6925 11634 1.97 0.92 0.31 2.59625285751431e-39 6.18920718702836e-35
101 3 DEND (L) all CCDC50 152137 18111 1.95 0.86 0.05 1.0234328367102e-160 2.43976153943344e-156
101 3 DEND (L) all PLD4 122618 23792 1.95 0.78 0.16 4.04088595656723e-45 9.63306803186063e-41
101 3 DEND (L) all HERPUD1 9709 13744 1.89 0.92 0.31 9.53932374576501e-36 2.27407938775292e-31
101 3 DEND (L) all DERL3 91319 14236 1.87 0.86 0.07 2.70258840184087e-107 6.44270049114844e-103
101 3 DEND (L) all CLIC3 9022 2064 1.81 0.6 0.01 6.34493717982845e-208 1.5125695742993e-203
101 3 DEND (L) all MZB1 51237 30125 1.7 0.92 0.16 6.26430485221264e-58 1.49334763371897e-53
101 3 DEND (L) all IGKC 3514 5716 1.69 0.8 0.04 6.91712072751104e-140 1.64897241023136e-135
101 3 DEND (L) all ITM2C 81618 6175 1.67 0.92 0.35 1.58282311929092e-33 3.77329203407762e-29
101 3 DEND (L) all RUNX2 860 10472 1.66 0.82 0.18 2.24901462718819e-43 5.36142596975393e-39
101 3 DEND (L) all C12orf75 387882 35164 1.63 0.86 0.19 8.38133990349659e-46 1.99802761959455e-41
101 3 DEND (L) all IL3RA 3563 6012 1.55 0.82 0.16 8.11995841491258e-48 1.93571688653101e-43
101 3 DEND (L) all MEF2C 4208 6996 1.51 0.86 0.48 5.25358486359159e-21 1.2524020956316e-16
101 3 DEND (L) all RASD1 51655 15828 1.5 0.58 0.03 2.35419122032729e-102 5.61215645013822e-98
101 3 DEND (L) all HSPA1B 3304 5233 1.47 0.74 0.3 3.09587820005796e-16 7.38026404111817e-12
101 3 DEND (L) all PPP1R15A 23645 14375 1.44 0.9 0.66 1.64876198888549e-16 3.93048370530411e-12
101 3 DEND (L) all RUBCNL 80183 20420 1.41 0.62 0.02 8.08931621461621e-189 1.92841209240236e-184
101 3 DEND (L) all MIR155HG 114614 35460 1.39 0.66 0.24 2.81489438837007e-15 6.7104267324354e-11
101 3 DEND (L) all JUN 3725 6204 1.37 0.92 0.67 3.29459633963534e-13 7.85398821405668e-09
101 3 DEND (L) all GADD45B 4616 4096 1.34 0.72 0.27 7.59370245398046e-18 1.8102627280044e-13
101 3 DEND (L) all PTCRA 171558 21290 1.33 0.62 0.001 0 0
101 3 DEND (L) all RHEX 440712 25341 1.32 0.84 0.28 1.13526009939347e-27 2.7063465509441e-23
101 3 DEND (L) all SPCS1 28972 23401 1.31 0.94 0.66 2.41322548165726e-25 5.75288822572274e-21
101 3 DEND (L) all LILRA4 23547 15503 1.3 0.5 0.004 0 0
101 3 DEND (L) all CD74 972 1697 1.3 0.98 0.81 3.52852527758167e-21 8.41165140922695e-17
101 3 DEND (L) all OFD1 8481 2567 1.28 0.74 0.21 2.52228173659885e-28 6.012867431878e-24
101 3 DEND (L) all HSPA1A 3303 5232 1.27 0.5 0.33 0.000162123430501 1
101 3 DEND (L) all DNAJB1 3337 5270 1.26 0.64 0.39 1.96039455172328e-07 0.004673384571853
101 3 DEND (L) all HSPA5 3309 5238 1.26 0.86 0.47 4.62826617853769e-15 1.1033323743016e-10
101 3 DEND (L) all RGS1 5996 9991 1.22 0.44 0.06 1.14351878120716e-30 2.72603442251974e-26
101 3 DEND (L) all ZFP36 7538 12862 1.2 0.94 0.68 1.63223170474599e-11 3.89107716094396e-07
101 3 DEND (L) all LINC00996 285972 27800 1.18 0.6 0.04 1.91024337051387e-79 4.55382917096801e-75
101 3 DEND (L) all CLEC4C 170482 13258 1.18 0.56 0.001 0 0
101 3 DEND (L) all FCHSD2 9873 29114 1.18 0.68 0.18 1.52522742212908e-27 3.63598965161352e-23
101 3 DEND (L) all SMPD3 55512 14240 1.17 0.56 0.009 0 0
101 3 DEND (L) all BLNK 29760 14211 1.17 0.68 0.05 6.97394401818638e-86 1.66251851449545e-81
101 3 DEND (L) all RP11-386I14.4 NULL 1.17 0.62 0.22 2.14704768346011e-15 5.11834697260055e-11
101 3 DEND (L) all BTG2 7832 1131 1.17 0.6 0.34 3.43669107496417e-07 0.008192727853607
101 3 DEND (L) all SPIB 6689 11242 1.14 0.52 0.01 2.71676318551106e-184 6.47649175793981e-180
101 3 DEND (L) all RAB11FIP1 80223 30265 1.12 0.76 0.31 5.16197890744017e-19 1.23056415174466e-14
101 3 DEND (L) all CD2AP 23607 14258 1.11 0.6 0.14 1.51411429645871e-25 3.60949707132792e-21
101 3 DEND (L) all PPP1R14B 26472 9057 1.1 0.7 0.17 6.51620347648526e-31 1.55339774675932e-26
101 3 DEND (L) all PRMT9 90826 25099 1.09 0.54 0.11 1.02779037202056e-24 2.4501494678598e-20
101 3 DEND (L) all MIR181A1HG 100131234 48659 1.08 0.64 0.24 2.22480050504283e-15 5.3037019239716e-11
101 3 DEND (L) all RNU12 267010 19380 1.08 0.42 0.13 6.58220944077986e-11 1.56913290858751e-06
101 3 DEND (L) all ZDHHC17 23390 18412 1.08 0.62 0.12 2.96547348592647e-30 7.06939224310011e-26
101 3 DEND (L) all SEC61B 10952 16993 1.07 0.94 0.66 4.65371352255881e-21 1.10939876664279e-16
101 3 DEND (L) all ZFAT 57623 19899 1.06 0.52 0.02 2.10486972606769e-97 5.01779893997277e-93
101 3 DEND (L) all UBE2J1 51465 17598 1.05 0.84 0.46 1.0338170373282e-17 2.4645164352867e-13
101 3 DEND (L) all TNFRSF21 27242 13469 1.05 0.56 0.04 4.26552592197829e-79 1.0168587245404e-74
101 3 DEND (L) all GAS6 2621 4168 1.04 0.58 0.04 6.35116147136257e-82 1.51405338315812e-77
101 3 DEND (L) all UBC 7316 12468 1.03 0.98 0.88 1.29528810849341e-17 3.08783732183745e-13
101 3 DEND (L) all TNFSF9 8744 11939 1.03 0.3 0.04 6.69161767330426e-20 1.595214737139e-15
101 3 DEND (L) all LSP1 4046 6707 1.02 0.88 0.62 1.22070457704382e-16 2.91003764121477e-12
101 3 DEND (L) all CD83 9308 1703 1.02 0.46 0.15 9.72868482921813e-12 2.31922117643731e-07
101 3 DEND (L) all ZNF10 7556 12879 1.02 0.54 0.11 1.78887628298401e-25 4.26450217100559e-21
101 3 DEND (L) all PTPRS 5802 9681 1.02 0.5 0.006 0 0
101 3 DEND (L) all PAXX 286257 27849 1.01 0.8 0.51 1.03737824186948e-13 2.47300599079265e-09
101 3 DEND (L) all ALOX5AP 241 436 1.01 0.72 0.19 6.29698908912269e-24 1.50113922895596e-19
101 3 DEND (L) all HMGCS1 3157 5007 1.01 0.44 0.11 1.14170960620814e-15 2.72172153023959e-11
101 3 DEND (L) all SSR4 6748 11326 1 0.98 0.74 2.742728032119e-17 6.53838935576848e-13
101 3 DEND (L) all STK17B 9262 11396 0.99 0.82 0.54 9.31587652653121e-14 2.22081180515977e-09
101 3 DEND (L) all EGR1 1958 3238 0.99 0.6 0.32 6.34717507229846e-07 0.01
101 3 DEND (L) all PPM1K 152926 25415 0.99 0.64 0.22 2.7181973676396e-18 6.47991070471605e-14
101 3 DEND (L) all IER2 9592 28871 0.98 0.88 0.68 1.48748839653392e-08 0.00035460235885
101 3 DEND (L) all NFKBIA 4792 7797 0.98 0.66 0.53 0.001671591597487 1
101 3 DEND (L) all MAPKAPK2 9261 6887 0.98 0.54 0.13 3.4194562064294e-21 8.15164165050705e-17
101 3 DEND (L) all B4GALT1 2683 924 0.98 0.52 0.14 1.82928857141714e-17 4.36084102540131e-13
101 3 DEND (L) all PLAC8 51316 19254 0.96 0.84 0.53 2.9507451846166e-13 7.03428144560752e-09
101 3 DEND (L) all DUSP2 1844 3068 0.95 0.3 0.18 0.005749500121142 1
101 3 DEND (L) all PARK7 11315 16369 0.94 0.8 0.58 5.20723007745666e-13 1.24135157816489e-08
101 3 DEND (L) all KLF6 1316 2235 0.94 0.88 0.78 1.69862692815209e-07 0.004049356734022
101 3 DEND (L) all NFKBIZ 64332 29805 0.93 0.7 0.49 5.5070434621847e-06 0.13
101 3 DEND (L) all TUBB4B 10383 20771 0.92 0.58 0.37 1.76003309202495e-05 0.41
101 3 DEND (L) all HIST1H2AC 8334 4733 0.91 0.52 0.29 1.51469946314955e-06 0.03
101 3 DEND (L) all TMEM107 84314 28128 0.91 0.52 0.23 2.65922303106088e-09 6.33932178374602e-05
101 3 DEND (L) all LDLRAD4 753 1224 0.91 0.26 0.08 1.30802827074028e-06 0.03
101 3 DEND (L) all HIST1H1C 3006 4716 0.9 0.58 0.25 4.43703118895968e-10 1.0577438651361e-05
101 3 DEND (L) all CYTH4 27128 9505 0.9 0.68 0.24 1.12781352765173e-17 2.68859466856897e-13
101 3 DEND (L) all LILRB4 11006 6608 0.9 0.5 0.08 1.37643764566122e-29 3.28128970349177e-25
101 3 DEND (L) all TRA2B 6434 10781 0.9 0.82 0.62 1.39974258602373e-09 3.33684635082197e-05
101 3 DEND (L) all MS4A6A 64231 13375 0.89 0.66 0.22 3.80466410856696e-15 9.06993876841277e-11
101 3 DEND (L) all AFF3 3899 6473 0.88 0.64 0.11 2.05795883560183e-37 4.90596806819121e-33
101 3 DEND (L) all PPIB 5479 9255 0.88 0.96 0.73 6.7247072591227e-18 1.60310296350226e-13
101 3 DEND (L) all RGS2 5997 9998 0.87 0.42 0.16 9.84388985218433e-08 0.002346684901862
101 3 DEND (L) all RPPH1 85495 19273 0.86 0.38 0.06 2.4821516457244e-22 5.91720130824239e-18
101 3 DEND (L) all NPC2 10577 14537 0.86 0.88 0.61 1.85601046554634e-12 4.42454334881592e-08
101 3 DEND (L) all CARD11 84433 16393 0.86 0.46 0.03 1.57620439091082e-59 3.75751364749229e-55
101 3 DEND (L) all BCL11A 53335 13221 0.86 0.66 0.25 9.5606578810458e-16 2.27916523226251e-11
101 3 DEND (L) all CD36 948 1663 0.85 0.7 0.24 4.38880729491062e-15 1.04624777103374e-10
101 3 DEND (L) all IDH3A 3419 5384 0.85 0.54 0.15 9.16674945909169e-18 2.18526140355287e-13
101 3 DEND (L) all LIME1 54923 26016 0.84 0.58 0.16 7.78238384269306e-18 1.8552424842596e-13