Marker Genes

Dataset: A general approach for detecting expressed mutations in AML cells using single cell RNA-sequencing

  • tissue: Bone marrow
  • ontology: Bone marrow
  • genotype: -
  • stage: Adult
  • treatment condition: AML
  • cell/nucleus: Cells
  • pmid: 31413257
  • subset name: all
  • total genes: 20090
  • clustering: Seurat
  • pseudotime: None
  • link:

Rows:100
dataset id cluster id cluster name cell type name sample id gene symbol entrez geneid species specific geneid
avg log fc (?)
pct 1 pct 2 p value padj
101 3 DEND (L) all PTGDS 5730 9592 3.61 0.4 0.01 1.0190951129272E-91 2.4294208397073E-87
101 3 DEND (L) all IRF7 3665 6122 2.71 0.9 0.25 4.8788042436278E-44 1.1630581436384E-39
101 3 DEND (L) all IRF8 3394 5358 2.54 0.9 0.15 3.5105821330117E-65 8.3688767468865E-61
101 3 DEND (L) all JCHAIN 3512 5713 2.48 0.98 0.06 2.8671898803444E-177 6.8350939557529E-173
101 3 DEND (L) all UGCG 7357 12524 2.3 0.9 0.07 2.4180030479878E-131 5.7642774660982E-127
101 3 DEND (L) all SERPINF1 5176 8824 2.01 0.82 0.02 7.8916069608603E-306 1.8812801833995E-301
101 3 DEND (L) all GZMB 3002 4709 2.01 0.76 0.01 0 0
101 3 DEND (L) all NIBAN3 199786 24130 2.01 0.84 0.01 0 0
101 3 DEND (L) all TCF4 6925 11634 1.97 0.92 0.31 2.5962528575143E-39 6.1892071870284E-35
101 3 DEND (L) all CCDC50 152137 18111 1.95 0.86 0.05 1.0234328367102E-160 2.4397615394334E-156
101 3 DEND (L) all PLD4 122618 23792 1.95 0.78 0.16 4.0408859565672E-45 9.6330680318606E-41
101 3 DEND (L) all HERPUD1 9709 13744 1.89 0.92 0.31 9.539323745765E-36 2.2740793877529E-31
101 3 DEND (L) all DERL3 91319 14236 1.87 0.86 0.07 2.7025884018409E-107 6.4427004911484E-103
101 3 DEND (L) all CLIC3 9022 2064 1.81 0.6 0.01 6.3449371798285E-208 1.5125695742993E-203
101 3 DEND (L) all MZB1 51237 30125 1.7 0.92 0.16 6.2643048522126E-58 1.493347633719E-53
101 3 DEND (L) all IGKC 3514 5716 1.69 0.8 0.04 6.917120727511E-140 1.6489724102314E-135
101 3 DEND (L) all ITM2C 81618 6175 1.67 0.92 0.35 1.5828231192909E-33 3.7732920340776E-29
101 3 DEND (L) all RUNX2 860 10472 1.66 0.82 0.18 2.2490146271882E-43 5.3614259697539E-39
101 3 DEND (L) all C12orf75 387882 35164 1.63 0.86 0.19 8.3813399034966E-46 1.9980276195946E-41
101 3 DEND (L) all IL3RA 3563 6012 1.55 0.82 0.16 8.1199584149126E-48 1.935716886531E-43
101 3 DEND (L) all MEF2C 4208 6996 1.51 0.86 0.48 5.2535848635916E-21 1.2524020956316E-16
101 3 DEND (L) all RASD1 51655 15828 1.5 0.58 0.03 2.3541912203273E-102 5.6121564501382E-98
101 3 DEND (L) all HSPA1B 3304 5233 1.47 0.74 0.3 3.095878200058E-16 7.3802640411182E-12
101 3 DEND (L) all PPP1R15A 23645 14375 1.44 0.9 0.66 1.6487619888855E-16 3.9304837053041E-12
101 3 DEND (L) all RUBCNL 80183 20420 1.41 0.62 0.02 8.0893162146162E-189 1.9284120924024E-184
101 3 DEND (L) all MIR155HG 114614 35460 1.39 0.66 0.24 2.8148943883701E-15 6.7104267324354E-11
101 3 DEND (L) all JUN 3725 6204 1.37 0.92 0.67 3.2945963396353E-13 7.8539882140567E-9
101 3 DEND (L) all GADD45B 4616 4096 1.34 0.72 0.27 7.5937024539805E-18 1.8102627280044E-13
101 3 DEND (L) all PTCRA 171558 21290 1.33 0.62 0.001 0 0
101 3 DEND (L) all RHEX 440712 25341 1.32 0.84 0.28 1.1352600993935E-27 2.7063465509441E-23
101 3 DEND (L) all SPCS1 28972 23401 1.31 0.94 0.66 2.4132254816573E-25 5.7528882257227E-21
101 3 DEND (L) all LILRA4 23547 15503 1.3 0.5 0.004 0 0
101 3 DEND (L) all CD74 972 1697 1.3 0.98 0.81 3.5285252775817E-21 8.411651409227E-17
101 3 DEND (L) all OFD1 8481 2567 1.28 0.74 0.21 2.5222817365989E-28 6.012867431878E-24
101 3 DEND (L) all HSPA1A 3303 5232 1.27 0.5 0.33 0.000162123430501 1
101 3 DEND (L) all DNAJB1 3337 5270 1.26 0.64 0.39 1.9603945517233E-7 0.004673384571853
101 3 DEND (L) all HSPA5 3309 5238 1.26 0.86 0.47 4.6282661785377E-15 1.1033323743016E-10
101 3 DEND (L) all RGS1 5996 9991 1.22 0.44 0.06 1.1435187812072E-30 2.7260344225197E-26
101 3 DEND (L) all ZFP36 7538 12862 1.2 0.94 0.68 1.632231704746E-11 3.891077160944E-7
101 3 DEND (L) all LINC00996 285972 27800 1.18 0.6 0.04 1.9102433705139E-79 4.553829170968E-75
101 3 DEND (L) all CLEC4C 170482 13258 1.18 0.56 0.001 0 0
101 3 DEND (L) all FCHSD2 9873 29114 1.18 0.68 0.18 1.5252274221291E-27 3.6359896516135E-23
101 3 DEND (L) all SMPD3 55512 14240 1.17 0.56 0.009 0 0
101 3 DEND (L) all BLNK 29760 14211 1.17 0.68 0.05 6.9739440181864E-86 1.6625185144955E-81
101 3 DEND (L) all RP11-386I14.4 NULL 1.17 0.62 0.22 2.1470476834601E-15 5.1183469726005E-11
101 3 DEND (L) all BTG2 7832 1131 1.17 0.6 0.34 3.4366910749642E-7 0.008192727853607
101 3 DEND (L) all SPIB 6689 11242 1.14 0.52 0.01 2.7167631855111E-184 6.4764917579398E-180
101 3 DEND (L) all RAB11FIP1 80223 30265 1.12 0.76 0.31 5.1619789074402E-19 1.2305641517447E-14
101 3 DEND (L) all CD2AP 23607 14258 1.11 0.6 0.14 1.5141142964587E-25 3.6094970713279E-21
101 3 DEND (L) all PPP1R14B 26472 9057 1.1 0.7 0.17 6.5162034764853E-31 1.5533977467593E-26
101 3 DEND (L) all PRMT9 90826 25099 1.09 0.54 0.11 1.0277903720206E-24 2.4501494678598E-20
101 3 DEND (L) all MIR181A1HG 100131234 48659 1.08 0.64 0.24 2.2248005050428E-15 5.3037019239716E-11
101 3 DEND (L) all RNU12 267010 19380 1.08 0.42 0.13 6.5822094407799E-11 1.5691329085875E-6
101 3 DEND (L) all ZDHHC17 23390 18412 1.08 0.62 0.12 2.9654734859265E-30 7.0693922431001E-26
101 3 DEND (L) all SEC61B 10952 16993 1.07 0.94 0.66 4.6537135225588E-21 1.1093987666428E-16
101 3 DEND (L) all ZFAT 57623 19899 1.06 0.52 0.02 2.1048697260677E-97 5.0177989399728E-93
101 3 DEND (L) all UBE2J1 51465 17598 1.05 0.84 0.46 1.0338170373282E-17 2.4645164352867E-13
101 3 DEND (L) all TNFRSF21 27242 13469 1.05 0.56 0.04 4.2655259219783E-79 1.0168587245404E-74
101 3 DEND (L) all GAS6 2621 4168 1.04 0.58 0.04 6.3511614713626E-82 1.5140533831581E-77
101 3 DEND (L) all UBC 7316 12468 1.03 0.98 0.88 1.2952881084934E-17 3.0878373218374E-13
101 3 DEND (L) all TNFSF9 8744 11939 1.03 0.3 0.04 6.6916176733043E-20 1.595214737139E-15
101 3 DEND (L) all LSP1 4046 6707 1.02 0.88 0.62 1.2207045770438E-16 2.9100376412148E-12
101 3 DEND (L) all CD83 9308 1703 1.02 0.46 0.15 9.7286848292181E-12 2.3192211764373E-7
101 3 DEND (L) all ZNF10 7556 12879 1.02 0.54 0.11 1.788876282984E-25 4.2645021710056E-21
101 3 DEND (L) all PTPRS 5802 9681 1.02 0.5 0.006 0 0
101 3 DEND (L) all PAXX 286257 27849 1.01 0.8 0.51 1.0373782418695E-13 2.4730059907927E-9
101 3 DEND (L) all ALOX5AP 241 436 1.01 0.72 0.19 6.2969890891227E-24 1.501139228956E-19
101 3 DEND (L) all HMGCS1 3157 5007 1.01 0.44 0.11 1.1417096062081E-15 2.7217215302396E-11
101 3 DEND (L) all SSR4 6748 11326 1 0.98 0.74 2.742728032119E-17 6.5383893557685E-13
101 3 DEND (L) all STK17B 9262 11396 0.99 0.82 0.54 9.3158765265312E-14 2.2208118051598E-9
101 3 DEND (L) all EGR1 1958 3238 0.99 0.6 0.32 6.3471750722985E-7 0.01
101 3 DEND (L) all PPM1K 152926 25415 0.99 0.64 0.22 2.7181973676396E-18 6.4799107047161E-14
101 3 DEND (L) all IER2 9592 28871 0.98 0.88 0.68 1.4874883965339E-8 0.00035460235885
101 3 DEND (L) all NFKBIA 4792 7797 0.98 0.66 0.53 0.001671591597487 1
101 3 DEND (L) all MAPKAPK2 9261 6887 0.98 0.54 0.13 3.4194562064294E-21 8.1516416505071E-17
101 3 DEND (L) all B4GALT1 2683 924 0.98 0.52 0.14 1.8292885714171E-17 4.3608410254013E-13
101 3 DEND (L) all PLAC8 51316 19254 0.96 0.84 0.53 2.9507451846166E-13 7.0342814456075E-9
101 3 DEND (L) all DUSP2 1844 3068 0.95 0.3 0.18 0.005749500121142 1
101 3 DEND (L) all PARK7 11315 16369 0.94 0.8 0.58 5.2072300774567E-13 1.2413515781649E-8
101 3 DEND (L) all KLF6 1316 2235 0.94 0.88 0.78 1.6986269281521E-7 0.004049356734022
101 3 DEND (L) all NFKBIZ 64332 29805 0.93 0.7 0.49 5.5070434621847E-6 0.13
101 3 DEND (L) all TUBB4B 10383 20771 0.92 0.58 0.37 1.7600330920249E-5 0.41
101 3 DEND (L) all HIST1H2AC 8334 4733 0.91 0.52 0.29 1.5146994631495E-6 0.03
101 3 DEND (L) all TMEM107 84314 28128 0.91 0.52 0.23 2.6592230310609E-9 6.339321783746E-5
101 3 DEND (L) all LDLRAD4 753 1224 0.91 0.26 0.08 1.3080282707403E-6 0.03
101 3 DEND (L) all HIST1H1C 3006 4716 0.9 0.58 0.25 4.4370311889597E-10 1.0577438651361E-5
101 3 DEND (L) all CYTH4 27128 9505 0.9 0.68 0.24 1.1278135276517E-17 2.688594668569E-13
101 3 DEND (L) all LILRB4 11006 6608 0.9 0.5 0.08 1.3764376456612E-29 3.2812897034918E-25
101 3 DEND (L) all TRA2B 6434 10781 0.9 0.82 0.62 1.3997425860237E-9 3.336846350822E-5
101 3 DEND (L) all MS4A6A 64231 13375 0.89 0.66 0.22 3.804664108567E-15 9.0699387684128E-11
101 3 DEND (L) all AFF3 3899 6473 0.88 0.64 0.11 2.0579588356018E-37 4.9059680681912E-33
101 3 DEND (L) all PPIB 5479 9255 0.88 0.96 0.73 6.7247072591227E-18 1.6031029635023E-13
101 3 DEND (L) all RGS2 5997 9998 0.87 0.42 0.16 9.8438898521843E-8 0.002346684901862
101 3 DEND (L) all RPPH1 85495 19273 0.86 0.38 0.06 2.4821516457244E-22 5.9172013082424E-18
101 3 DEND (L) all NPC2 10577 14537 0.86 0.88 0.61 1.8560104655463E-12 4.4245433488159E-8
101 3 DEND (L) all CARD11 84433 16393 0.86 0.46 0.03 1.5762043909108E-59 3.7575136474923E-55
101 3 DEND (L) all BCL11A 53335 13221 0.86 0.66 0.25 9.5606578810458E-16 2.2791652322625E-11
101 3 DEND (L) all CD36 948 1663 0.85 0.7 0.24 4.3888072949106E-15 1.0462477710337E-10
101 3 DEND (L) all IDH3A 3419 5384 0.85 0.54 0.15 9.1667494590917E-18 2.1852614035529E-13
101 3 DEND (L) all LIME1 54923 26016 0.84 0.58 0.16 7.7823838426931E-18 1.8552424842596E-13