Marker Genes

Dataset: A general approach for detecting expressed mutations in AML cells using single cell RNA-sequencing

  • tissue: Bone marrow
  • ontology: Bone marrow
  • genotype: -
  • stage: Adult
  • treatment condition: AML
  • cell/nucleus: Cells
  • pmid: 31413257
  • subset name: all
  • total genes: 20090
  • clustering: Seurat
  • pseudotime: None
  • link:

Rows:100
dataset id cluster id cluster name cell type name sample id gene symbol entrez geneid species specific geneid
avg log fc (?)
pct 1 pct 2 p value padj
101 15 T-CELL all CD3E 916 1674 2.49 0.92 0.02 0 0
101 15 T-CELL all IL32 9235 16830 2.47 0.78 0.01 0 0
101 15 T-CELL all IL7R 3575 6024 2.45 0.72 0.01 0 0
101 15 T-CELL all CCL5 6352 10632 2.19 0.34 0.11 0 0
101 15 T-CELL all CCL4 6351 10630 2.1 0.21 0.02 0 0
101 15 T-CELL all LTB 4050 6711 1.98 0.77 0.24 0 0
101 15 T-CELL all CD3D 915 1673 1.86 0.77 0.01 0 0
101 15 T-CELL all GNLY 10578 4414 1.86 0.11 0.02 0 0
101 15 T-CELL all CD7 924 1695 1.68 0.69 0.08 0 0
101 15 T-CELL all IFITM1 8519 5412 1.6 0.94 0.46 0 0
101 15 T-CELL all LCK 3932 6524 1.49 0.67 0.02 0 0
101 15 T-CELL all EVL 51466 20234 1.46 0.83 0.33 0 0
101 15 T-CELL all NKG7 4818 7830 1.43 0.29 0.35 0.006249309868171 1
101 15 T-CELL all TRBC2 28638 12157 1.4 0.62 0.07 0 0
101 15 T-CELL all LINC00861 100130231 45133 1.39 0.54 0.008 0 0
101 15 T-CELL all GZMA 3001 4708 1.39 0.27 0.007 0 0
101 15 T-CELL all PTPRCAP 5790 9667 1.38 0.88 0.4 0 0
101 15 T-CELL all JUNB 3726 6205 1.36 0.83 0.72 0 0
101 15 T-CELL all DUSP2 1844 3068 1.31 0.34 0.14 0 0
101 15 T-CELL all TC2N 123036 19859 1.3 0.53 0.01 0 0
101 15 T-CELL all CD3G 917 1675 1.29 0.55 0.007 0 0
101 15 T-CELL all LEF1 51176 6551 1.29 0.49 0.006 0 0
101 15 T-CELL all CD2 914 1639 1.28 0.54 0.01 0 0
101 15 T-CELL all CD247 919 1677 1.28 0.54 0.009 0 0
101 15 T-CELL all CD69 969 1694 1.28 0.81 0.46 0 0
101 15 T-CELL all TRBC1 28639 12156 1.28 0.44 0.01 0 0
101 15 T-CELL all LAT 27040 18874 1.25 0.6 0.04 0 0
101 15 T-CELL all KLRB1 3820 6373 1.25 0.22 0.007 0 0
101 15 T-CELL all GZMK 3003 4711 1.25 0.19 0.004 0 0
101 15 T-CELL all ZAP70 7535 12858 1.21 0.54 0.03 0 0
101 15 T-CELL all TCF7 6932 11639 1.19 0.46 0.01 0 0
101 15 T-CELL all BTG1 694 1130 1.18 0.95 0.71 0 0
101 15 T-CELL all SEPTIN1 1731 2879 1.18 0.58 0.12 0 0
101 15 T-CELL all CXCR4 7852 2561 1.18 0.69 0.26 0 0
101 15 T-CELL all CD8A 925 1706 1.16 0.27 0.004 0 0
101 15 T-CELL all CD8B 926 1707 1.14 0.25 0.007 0 0
101 15 T-CELL all SPOCK2 9806 13564 1.13 0.49 0.02 0 0
101 15 T-CELL all HLA-E 3133 4962 1.13 0.94 0.74 0 0
101 15 T-CELL all FLT3LG 2323 3766 1.12 0.5 0.06 0 0
101 15 T-CELL all GIMAP7 168537 22404 1.11 0.5 0.08 0 0
101 15 T-CELL all NOSIP 51070 17946 1.1 0.64 0.36 0 0
101 15 T-CELL all CST7 8530 2479 1.1 0.29 0.15 0 0
101 15 T-CELL all SCML4 256380 21397 1.09 0.43 0.02 0 0
101 15 T-CELL all TNFAIP3 7128 11896 1.07 0.42 0.16 0 0
101 15 T-CELL all TXNIP 10628 16952 1.07 0.94 0.76 0 0
101 15 T-CELL all KLRD1 3824 6378 1.06 0.18 0.005 0 0
101 15 T-CELL all DDIT4 54541 24944 1.06 0.5 0.15 0 0
101 15 T-CELL all ITK 3702 6171 1.05 0.42 0.006 0 0
101 15 T-CELL all JUN 3725 6204 1.05 0.65 0.67 1.29012080508576e-208 3.07551898724393e-204
101 15 T-CELL all PIK3IP1 113791 24942 1.04 0.48 0.07 0 0
101 15 T-CELL all GZMM 3004 4712 1.04 0.39 0.008 0 0
101 15 T-CELL all GIMAP4 55303 21872 1.04 0.52 0.09 0 0
101 15 T-CELL all CCR7 1236 1608 1.04 0.38 0.01 0 0
101 15 T-CELL all HLA-A 3105 4931 1.03 0.98 0.89 0 0
101 15 T-CELL all OXNAD1 92106 25128 1.03 0.45 0.06 0 0
101 15 T-CELL all GZMH 2999 4710 1.02 0.15 0.005 0 0
101 15 T-CELL all STK17A 9263 11395 1 0.5 0.13 0 0
101 15 T-CELL all CD27 939 11922 1 0.41 0.01 0 0
101 15 T-CELL all MAL 4118 6817 1 0.39 0.01 0 0
101 15 T-CELL all CD6 923 1691 1 0.41 0.01 0 0
101 15 T-CELL all IL2RG 3561 6010 0.99 0.72 0.42 0 0
101 15 T-CELL all SKAP1 8631 15605 0.99 0.44 0.03 0 0
101 15 T-CELL all ETS1 2113 3488 0.98 0.44 0.05 0 0
101 15 T-CELL all CAMK4 814 1464 0.98 0.39 0.005 0 0
101 15 T-CELL all SARAF 51669 28789 0.98 0.92 0.8 0 0
101 15 T-CELL all PLAAT4 5920 9869 0.97 0.52 0.18 0 0
101 15 T-CELL all TLE5 166 307 0.96 0.69 0.45 0 0
101 15 T-CELL all LIME1 54923 26016 0.96 0.47 0.1 0 0
101 15 T-CELL all HLA-B 3106 4932 0.96 0.99 0.9 0 0
101 15 T-CELL all CD52 1043 1804 0.95 0.88 0.67 0 0
101 15 T-CELL all ISG20 3669 6130 0.94 0.5 0.08 0 0
101 15 T-CELL all CLEC2D 29121 14351 0.94 0.44 0.1 0 0
101 15 T-CELL all FCMR 9214 14315 0.92 0.42 0.03 0 0
101 15 T-CELL all SLC2A3 6515 11007 0.91 0.56 0.31 0 0
101 15 T-CELL all MYL12A 10627 16701 0.9 0.9 0.78 0 0
101 15 T-CELL all B2M 567 914 0.9 0.99 0.97 0 0
101 15 T-CELL all LBH 81606 29532 0.89 0.4 0.04 0 0
101 15 T-CELL all TBC1D10C 374403 24702 0.89 0.61 0.34 0 0
101 15 T-CELL all TRAF3IP3 80342 30766 0.89 0.6 0.32 0 0
101 15 T-CELL all CORO1B 57175 2253 0.89 0.68 0.46 0 0
101 15 T-CELL all LEPROTL1 23484 6555 0.89 0.6 0.37 0 0
101 15 T-CELL all TRAT1 50852 30698 0.88 0.34 0.007 0 0
101 15 T-CELL all PRF1 5551 9360 0.87 0.2 0.01 0 0
101 15 T-CELL all CYTIP 9595 9506 0.87 0.57 0.27 0 0
101 15 T-CELL all HLA-F 3134 4963 0.86 0.56 0.29 0 0
101 15 T-CELL all CD48 962 1683 0.85 0.74 0.25 0 0
101 15 T-CELL all RHOH 399 686 0.85 0.47 0.18 0 0
101 15 T-CELL all TRAC 28755 12029 0.84 0.33 0.01 0 0
101 15 T-CELL all C12orf57 113246 29521 0.84 0.79 0.6 0 0
101 15 T-CELL all DENND2D 79961 26192 0.83 0.4 0.09 0 0
101 15 T-CELL all CALM1 801 1442 0.83 0.81 0.64 0 0
101 15 T-CELL all PRKCH 5583 9403 0.82 0.37 0.07 0 0
101 15 T-CELL all PTPRC 5788 9666 0.82 0.85 0.69 0 0
101 15 T-CELL all KLRG1 10219 6380 0.81 0.31 0.11 0 0
101 15 T-CELL all ARL4C 10123 698 0.81 0.4 0.1 0 0
101 15 T-CELL all LDLRAP1 26119 18640 0.81 0.36 0.07 0 0
101 15 T-CELL all TAGAP 117289 15669 0.8 0.46 0.26 0 0
101 15 T-CELL all CCND3 896 1585 0.8 0.71 0.49 0 0
101 15 T-CELL all CNN2 1265 2156 0.78 0.64 0.41 0 0
101 15 T-CELL all BCL11B 64919 13222 0.78 0.31 0.004 0 0