Marker Genes

Dataset: A general approach for detecting expressed mutations in AML cells using single cell RNA-sequencing

  • tissue: Bone marrow
  • ontology: Bone marrow
  • genotype: -
  • stage: Adult
  • treatment condition: AML
  • cell/nucleus: Cells
  • pmid: 31413257
  • subset name: all
  • total genes: 20090
  • clustering: Seurat
  • pseudotime: None
  • link:

Rows:100
dataset id cluster id cluster name cell type name sample id gene symbol entrez geneid species specific geneid
avg log fc (?)
pct 1 pct 2 p value padj
101 14 PRE-B-CELL all IGKC 3514 5716 2.31 0.16 0.04 6.2623181046058E-41 1.492874012957E-36
101 14 PRE-B-CELL all HBA2 3040 4824 2.27 0.6 0.14 3.098449772049E-236 7.3863944115877E-232
101 14 PRE-B-CELL all HBB 3043 4827 2.24 0.62 0.21 4.5204798112847E-162 1.0776371822121E-157
101 14 PRE-B-CELL all IGHA1 3493 5478 2.2 0.15 0.04 2.2844321885709E-33 5.4458578943343E-29
101 14 PRE-B-CELL all IGHG1 3500 5525 2.16 0.14 0.03 7.3430733102554E-45 1.7505152464318E-40
101 14 PRE-B-CELL all SLC25A37 51312 29786 1.93 0.67 0.3 1.4212653134326E-143 3.3881543806919E-139
101 14 PRE-B-CELL all JCHAIN 3512 5713 1.9 0.14 0.06 6.7132170811487E-16 1.600363819975E-11
101 14 PRE-B-CELL all HBD 3045 4829 1.79 0.58 0.08 0 0
101 14 PRE-B-CELL all ALAS2 212 397 1.76 0.54 0.05 0 0
101 14 PRE-B-CELL all HBA1 3039 4823 1.74 0.58 0.06 0 0
101 14 PRE-B-CELL all CA1 759 1368 1.73 0.52 0.06 0 0
101 14 PRE-B-CELL all AHSP 51327 18075 1.7 0.54 0.06 0 0
101 14 PRE-B-CELL all SLC4A1 6521 11027 1.57 0.45 0.04 0 0
101 14 PRE-B-CELL all SNCA 6622 11138 1.39 0.52 0.24 7.0461501266761E-87 1.6797317286983E-82
101 14 PRE-B-CELL all MZB1 51237 30125 1.36 0.22 0.16 3.2391926089072E-8 0.000772191126037
101 14 PRE-B-CELL all HBM 3042 4826 1.31 0.3 0.02 0 0
101 14 PRE-B-CELL all SLC25A39 51629 24279 1.31 0.6 0.38 4.4623846812961E-75 1.0637878841742E-70
101 14 PRE-B-CELL all TRIM58 25893 24150 1.25 0.49 0.21 5.7914350398706E-90 1.3806201991548E-85
101 14 PRE-B-CELL all IGLL5 100423062 38476 1.24 0.11 0.01 9.8557561167063E-71 2.3495137006616E-66
101 14 PRE-B-CELL all RETN 56729 20389 1.23 0.14 0.06 6.9150282792474E-16 1.6484735914898E-11
101 14 PRE-B-CELL all HMBS 3145 4982 1.2 0.41 0.13 9.1860712913633E-101 2.1898675351481E-96
101 14 PRE-B-CELL all SLC2A1 6513 11005 1.18 0.41 0.08 7.53237088544E-171 1.79564189538E-166
101 14 PRE-B-CELL all SELENBP1 8991 10719 1.16 0.43 0.04 0 0
101 14 PRE-B-CELL all BNIP3L 665 1085 1.16 0.58 0.46 6.8902058398063E-46 1.6425561701514E-41
101 14 PRE-B-CELL all BLVRB 645 1063 1.15 0.58 0.38 1.835320201765E-59 4.3752198289876E-55
101 14 PRE-B-CELL all ANKRD9 122416 20096 1.11 0.38 0.04 2.543728919124E-296 6.0639953702998E-292
101 14 PRE-B-CELL all TMCC2 9911 24239 1.07 0.34 0.03 0 0
101 14 PRE-B-CELL all XPO7 23039 14108 1.07 0.36 0.14 3.6894739607202E-61 8.795336974961E-57
101 14 PRE-B-CELL all EPB42 2038 3381 1.05 0.38 0.04 0 0
101 14 PRE-B-CELL all BCL2L1 598 992 1.03 0.49 0.18 1.7103004142592E-101 4.0771851575526E-97
101 14 PRE-B-CELL all HBQ1 3049 4833 1.02 0.37 0.05 1.040970145782E-246 2.4815687305296E-242
101 14 PRE-B-CELL all BSG 682 1116 0.94 0.6 0.56 2.6320974770793E-33 6.2746571756093E-29
101 14 PRE-B-CELL all ANK1 286 492 0.93 0.36 0.04 1.3864854328115E-290 3.3052426232794E-286
101 14 PRE-B-CELL all CPEB4 80315 21747 0.92 0.42 0.15 7.107159021141E-86 1.6942756390498E-81
101 14 PRE-B-CELL all UBB 7314 12463 0.92 0.73 0.78 2.7431858700189E-35 6.539480795538E-31
101 14 PRE-B-CELL all SSR4 6748 11326 0.91 0.51 0.74 0.006054396908517 1
101 14 PRE-B-CELL all TERF2IP 54386 19246 0.89 0.5 0.42 1.9545085763912E-25 4.6593529952591E-21
101 14 PRE-B-CELL all GLRX5 51218 20134 0.87 0.41 0.2 8.997682374858E-52 2.1449575013424E-47
101 14 PRE-B-CELL all RBM38 55544 15818 0.86 0.38 0.06 4.2597963662676E-177 1.0154928557545E-172
101 14 PRE-B-CELL all STOM 2040 3383 0.86 0.45 0.28 2.4836178598629E-39 5.9206966161271E-35
101 14 PRE-B-CELL all GYPA 2993 4702 0.85 0.28 0.03 3.0049374998026E-224 7.1634705057795E-220
101 14 PRE-B-CELL all RP11-20D14.6 NULL 0.84 0.24 0.03 9.204887617866E-169 2.1943531592231E-164
101 14 PRE-B-CELL all IFIT1B 439996 23442 0.83 0.3 0.02 1.2348840108202E-304 2.9438399933944E-300
101 14 PRE-B-CELL all DMTN 2039 3382 0.82 0.37 0.05 3.8235304405919E-202 9.114914217327E-198
101 14 PRE-B-CELL all RIOK3 8780 11451 0.81 0.5 0.34 2.8791675498541E-39 6.8636475220973E-35
101 14 PRE-B-CELL all DERL3 91319 14236 0.79 0.17 0.07 6.1953854154661E-21 1.476917929193E-16
101 14 PRE-B-CELL all EPB41 2035 3377 0.79 0.43 0.22 4.2618517699369E-49 1.0159828434353E-44
101 14 PRE-B-CELL all TENT5C 54855 24712 0.78 0.41 0.15 5.9021835004538E-76 1.4070215246732E-71
101 14 PRE-B-CELL all DCAF12 25853 19911 0.77 0.38 0.22 3.8491496681003E-32 9.1759878937843E-28
101 14 PRE-B-CELL all CA2 760 1373 0.77 0.31 0.12 1.5015369583924E-49 3.5795139551117E-45
101 14 PRE-B-CELL all WNK1 65125 14540 0.77 0.44 0.3 1.8063019553037E-31 4.3060432312484E-27
101 14 PRE-B-CELL all GMPR 2766 4376 0.77 0.31 0.05 1.6526600534047E-134 3.9397763013115E-130
101 14 PRE-B-CELL all FECH 2235 3647 0.76 0.36 0.12 4.5111177242208E-78 1.075405354277E-73
101 14 PRE-B-CELL all PCGF5 84333 28264 0.74 0.36 0.2 9.1442764252432E-32 2.1799040570137E-27
101 14 PRE-B-CELL all NARF 26502 29916 0.74 0.44 0.33 5.0782004847223E-25 1.210592213553E-20
101 14 PRE-B-CELL all FKBP11 51303 18624 0.72 0.24 0.14 1.0744276203244E-15 2.5613280040913E-11
101 14 PRE-B-CELL all FAM210B 116151 16102 0.71 0.36 0.19 1.9195016573457E-34 4.5759000009465E-30
101 14 PRE-B-CELL all TSPAN5 10098 17753 0.7 0.31 0.07 6.4861007988636E-95 1.5462215694411E-90
101 14 PRE-B-CELL all ADIPOR1 51094 24040 0.7 0.45 0.34 2.9254983496768E-24 6.9740955157946E-20
101 14 PRE-B-CELL all STRADB 55437 13205 0.7 0.39 0.23 9.9669638153958E-33 2.3760245039522E-28
101 14 PRE-B-CELL all TRAK2 66008 13206 0.69 0.32 0.16 6.1635290298118E-33 1.4693236854168E-28
101 14 PRE-B-CELL all PCSK1N 27344 17301 0.68 0.25 0.02 4.4767150055336E-192 1.0672040901691E-187
101 14 PRE-B-CELL all IFI27 3429 5397 0.68 0.2 0.02 1.6860409696244E-157 4.0193530674875E-153
101 14 PRE-B-CELL all TAL1 6886 11556 0.67 0.28 0.05 2.5772825658808E-117 6.1439839088032E-113
101 14 PRE-B-CELL all FKBP8 23770 3724 0.67 0.57 0.61 2.7065908154872E-16 6.4522418450399E-12
101 14 PRE-B-CELL all FBXO7 25793 13586 0.67 0.48 0.39 1.427993080782E-23 3.4041927052761E-19
101 14 PRE-B-CELL all MARCHF8 220972 23356 0.65 0.32 0.1 2.7607480014782E-68 6.5813471607239E-64
101 14 PRE-B-CELL all SMIM1 388588 44204 0.65 0.28 0.06 9.6629667533612E-107 2.3035546443338E-102
101 14 PRE-B-CELL all SEC62 7095 11846 0.65 0.53 0.45 8.5597852987404E-25 2.0405672173667E-20
101 14 PRE-B-CELL all GUK1 2987 4693 0.65 0.69 0.69 1.1490713582686E-35 2.7392712109765E-31
101 14 PRE-B-CELL all TOP1 7150 11986 0.64 0.43 0.34 1.527043631964E-20 3.640319314239E-16
101 14 PRE-B-CELL all KLF1 10661 6345 0.63 0.26 0.04 3.1499048010285E-126 7.5090580551719E-122
101 14 PRE-B-CELL all PNP 4860 7892 0.62 0.38 0.34 9.4804322377788E-10 2.2600402411641E-5
101 14 PRE-B-CELL all YPEL4 219539 18328 0.62 0.28 0.03 5.2000250071579E-229 1.2396339614564E-224
101 14 PRE-B-CELL all LPIN2 9663 14450 0.62 0.31 0.15 3.8783234591556E-32 9.245535294281E-28
101 14 PRE-B-CELL all TCP11L2 255394 28627 0.62 0.28 0.07 2.0654503162321E-82 4.9238270088656E-78
101 14 PRE-B-CELL all NUDT4 11163 8051 0.61 0.39 0.28 1.4635919157996E-20 3.4890567680748E-16
101 14 PRE-B-CELL all YOD1 55432 25035 0.59 0.27 0.06 8.0014612006736E-92 1.9074683356286E-87
101 14 PRE-B-CELL all TFRC 7037 11763 0.59 0.37 0.29 1.5721387421634E-12 3.7478215474434E-8
101 14 PRE-B-CELL all HEMGN 55363 17509 0.58 0.23 0.08 1.9934120467824E-40 4.7520949783246E-36
101 14 PRE-B-CELL all RHAG 6005 10006 0.58 0.21 0.02 1.763586508221E-128 4.204213876948E-124
101 14 PRE-B-CELL all FHDC1 85462 29363 0.58 0.24 0.02 5.0451151104978E-210 1.2027049911916E-205
101 14 PRE-B-CELL all GYPB 2994 4703 0.57 0.25 0.02 2.7279320615072E-215 6.503117241427E-211
101 14 PRE-B-CELL all GSPT1 2935 4621 0.57 0.34 0.27 1.9744390927317E-11 4.7068653531631E-7
101 14 PRE-B-CELL all S100P 6286 10504 0.56 0.1 0.03 5.4056423032735E-24 1.2886510686774E-19
101 14 PRE-B-CELL all E2F2 1870 3114 0.56 0.25 0.04 2.3318513929053E-116 5.5589005355469E-112
101 14 PRE-B-CELL all ARG1 383 663 0.55 0.17 0.02 3.8276566374084E-130 9.124750657918E-126
101 14 PRE-B-CELL all CCL4 6351 10630 0.55 0.11 0.05 4.6725278707231E-12 1.1138839191017E-7
101 14 PRE-B-CELL all PIM1 5292 8986 0.55 0.49 0.49 5.8596765536542E-8 0.001396888293626
101 14 PRE-B-CELL all TNS1 7145 11973 0.55 0.26 0.03 9.6902208945103E-191 2.3100517590423E-186
101 14 PRE-B-CELL all TBCEL 219899 28115 0.54 0.26 0.06 4.0438191608093E-87 9.6400604974533E-83
101 14 PRE-B-CELL all HIST1H1C 3006 4716 0.53 0.35 0.25 3.3094254918515E-14 7.8893394300247E-10
101 14 PRE-B-CELL all FOXO3 2309 3821 0.53 0.34 0.2 8.9285686339026E-24 2.128481476636E-19
101 14 PRE-B-CELL all NPRL3 8131 14124 0.53 0.32 0.17 4.7398858557524E-28 1.1299413891528E-23
101 14 PRE-B-CELL all NCOA4 8031 7671 0.52 0.51 0.55 1.3049967845378E-8 0.000311098183466
101 14 PRE-B-CELL all RHD 6007 10009 0.52 0.22 0.02 7.1293079341171E-180 1.6995557184142E-175
101 14 PRE-B-CELL all MYL4 4635 7585 0.51 0.22 0.02 5.8253770949876E-170 1.3887116456741E-165
101 14 PRE-B-CELL all RIPOR3 140876 16168 0.51 0.2 0.02 1.4591812644709E-136 3.4785422163722E-132
101 14 PRE-B-CELL all FBXO30 84085 15600 0.5 0.22 0.06 3.7338927239358E-54 8.9012268645907E-50
101 14 PRE-B-CELL all GATA1 2623 4170 0.5 0.24 0.04 2.7029123781614E-91 6.443472818299E-87