Marker Genes

Dataset: A general approach for detecting expressed mutations in AML cells using single cell RNA-sequencing

  • tissue: Bone marrow
  • ontology: Bone marrow
  • genotype: -
  • stage: Adult
  • treatment condition: AML
  • cell/nucleus: Cells
  • pmid: 31413257
  • subset name: all
  • total genes: 20090
  • clustering: Seurat
  • pseudotime: None
  • link:

Rows:100
dataset id cluster id cluster name cell type name sample id gene symbol entrez geneid species specific geneid
avg log fc (?)
pct 1 pct 2 p value padj
101 11 MONO all S100A9 6280 10499 3.13 0.93 0.14 0 0
101 11 MONO all S100A8 6279 10498 2.81 0.92 0.13 0 0
101 11 MONO all LYZ 4069 6740 2.75 0.97 0.3 0 0
101 11 MONO all FCN1 2219 3623 2.27 0.8 0.04 0 0
101 11 MONO all S100A12 6283 10489 2.19 0.73 0.03 0 0
101 11 MONO all VCAN 1462 2464 2.09 0.77 0.04 0 0
101 11 MONO all CTSS 1520 2545 1.87 0.93 0.41 0 0
101 11 MONO all MNDA 4332 7183 1.84 0.86 0.14 0 0
101 11 MONO all S100A11 6282 10488 1.78 0.94 0.42 0 0
101 11 MONO all FCER1G 2207 3611 1.68 0.94 0.29 0 0
101 11 MONO all S100A6 6277 10496 1.67 0.99 0.74 0 0
101 11 MONO all NCF1 653361 7660 1.48 0.66 0.17 0 0
101 11 MONO all GRN 2896 4601 1.45 0.92 0.39 0 0
101 11 MONO all CD14 929 1628 1.45 0.57 0.02 0 0
101 11 MONO all IFI30 10437 5398 1.43 0.77 0.12 0 0
101 11 MONO all TYROBP 7305 12449 1.42 0.99 0.61 0 0
101 11 MONO all MS4A6A 64231 13375 1.42 0.76 0.09 0 0
101 11 MONO all TYMP 1890 3148 1.39 0.88 0.31 0 0
101 11 MONO all IFITM3 10410 5414 1.37 0.76 0.31 0 0
101 11 MONO all S100A4 6275 10494 1.37 0.99 0.73 0 0
101 11 MONO all PSAP 5660 9498 1.36 0.91 0.48 0 0
101 11 MONO all CYBB 1536 2578 1.33 0.73 0.1 0 0
101 11 MONO all FTL 2512 3999 1.33 1 0.98 0 0
101 11 MONO all CD68 968 1693 1.24 0.79 0.21 0 0
101 11 MONO all CST3 1471 2475 1.2 0.96 0.61 0 0
101 11 MONO all RP11-1143G9.4 NULL 1.18 0.58 0.05 0 0
101 11 MONO all NAMPT 10135 30092 1.17 0.49 0.2 0 0
101 11 MONO all CEBPD 1052 1835 1.16 0.65 0.09 0 0
101 11 MONO all SERPINA1 5265 8941 1.15 0.6 0.08 0 0
101 11 MONO all NEAT1 283131 30815 1.15 0.97 0.84 0 0
101 11 MONO all ADA2 51816 1839 1.12 0.64 0.11 0 0
101 11 MONO all KLF4 9314 6348 1.11 0.62 0.12 0 0
101 11 MONO all ODF3B 440836 34388 1.1 0.68 0.15 0 0
101 11 MONO all AP1S2 8905 560 1.09 0.73 0.38 0 0
101 11 MONO all NCF2 4688 7661 1.09 0.68 0.1 0 0
101 11 MONO all RGS2 5997 9998 1.09 0.48 0.09 0 0
101 11 MONO all IFITM2 10581 5413 1.08 0.89 0.66 0 0
101 11 MONO all PLAC8 51316 19254 1.07 0.84 0.45 0 0
101 11 MONO all S100A10 6281 10487 1.07 0.78 0.5 0 0
101 11 MONO all SAT1 6303 10540 1.07 0.97 0.7 0 0
101 11 MONO all TMEM176B 28959 29596 1.06 0.48 0.05 0 0
101 11 MONO all MPEG1 219972 29619 1.05 0.55 0.04 0 0
101 11 MONO all FCGRT 2217 3621 1.04 0.66 0.14 0 0
101 11 MONO all CLEC7A 64581 14558 1.04 0.53 0.06 0 0
101 11 MONO all CFP 5199 8864 1.03 0.72 0.28 0 0
101 11 MONO all SAMHD1 25939 15925 1.01 0.79 0.27 0 0
101 11 MONO all FTH1 2495 3976 1 0.99 0.96 0 0
101 11 MONO all TNNT1 7138 11948 1 0.5 0.04 0 0
101 11 MONO all CSF3R 1441 2439 0.99 0.75 0.37 0 0
101 11 MONO all COTL1 23406 18304 0.99 0.91 0.51 0 0
101 11 MONO all NPC2 10577 14537 0.96 0.87 0.55 0 0
101 11 MONO all CSTA 1475 2481 0.96 0.71 0.21 0 0
101 11 MONO all SRGN 5552 9361 0.96 0.99 0.82 0 0
101 11 MONO all KCTD12 115207 14678 0.96 0.51 0.05 0 0
101 11 MONO all FGR 2268 3697 0.95 0.65 0.16 0 0
101 11 MONO all LTA4H 4048 6710 0.95 0.77 0.43 0 0
101 11 MONO all NAIP 4671 7634 0.95 0.61 0.18 0 0
101 11 MONO all STXBP2 6813 11445 0.94 0.74 0.37 0 0
101 11 MONO all TMEM176A 55365 24930 0.92 0.41 0.04 0 0
101 11 MONO all FGL2 10875 3696 0.92 0.52 0.06 0 0
101 11 MONO all CD300E 342510 28874 0.91 0.42 0.02 0 0
101 11 MONO all ANXA2 302 537 0.9 0.7 0.29 0 0
101 11 MONO all CTSD 1509 2529 0.9 0.87 0.57 0 0
101 11 MONO all LST1 7940 14189 0.89 0.91 0.53 0 0
101 11 MONO all TSPO 706 1158 0.89 0.95 0.7 0 0
101 11 MONO all LGALS1 3956 6561 0.89 0.97 0.54 0 0
101 11 MONO all LRP1 4035 6692 0.89 0.46 0.02 0 0
101 11 MONO all GABARAP 11337 4067 0.89 0.99 0.84 0 0
101 11 MONO all AGTRAP 57085 13539 0.88 0.64 0.2 0 0
101 11 MONO all SPI1 6688 11241 0.88 0.9 0.53 0 0
101 11 MONO all DUSP6 1848 3072 0.88 0.64 0.27 0 0
101 11 MONO all ARPC5 10092 708 0.87 0.88 0.56 0 0
101 11 MONO all MS4A7 58475 13378 0.87 0.51 0.09 0 0
101 11 MONO all ARRB2 409 712 0.85 0.76 0.37 0 0
101 11 MONO all APLP2 334 598 0.85 0.81 0.44 0 0
101 11 MONO all RAB31 11031 9771 0.85 0.57 0.12 0 0
101 11 MONO all ANXA5 308 543 0.85 0.63 0.17 0 0
101 11 MONO all CDA 978 1712 0.84 0.39 0.02 0 0
101 11 MONO all ITGAM 3684 6149 0.84 0.52 0.08 0 0
101 11 MONO all IL17RA 23765 5985 0.84 0.61 0.17 0 0
101 11 MONO all TCIRG1 10312 11647 0.84 0.77 0.38 0 0
101 11 MONO all SDCBP 6386 10662 0.84 0.76 0.46 0 0
101 11 MONO all CD48 962 1683 0.84 0.71 0.24 0 0
101 11 MONO all SLC11A1 6556 10907 0.83 0.45 0.05 0 0
101 11 MONO all ZFP36L1 677 1107 0.83 0.51 0.2 0 0
101 11 MONO all RNASE6 6039 10048 0.82 0.5 0.07 0 0
101 11 MONO all ZEB2 9839 14881 0.81 0.82 0.47 0 0
101 11 MONO all LYST 1130 1968 0.81 0.71 0.28 0 0
101 11 MONO all TNFSF13B 10673 11929 0.81 0.73 0.35 0 0
101 11 MONO all CTSB 1508 2527 0.8 0.7 0.34 0 0
101 11 MONO all LGALS2 3957 6562 0.79 0.45 0.05 0 0
101 11 MONO all LGALS3 3958 6563 0.79 0.44 0.08 0 0
101 11 MONO all SLC7A7 9056 11065 0.79 0.42 0.02 0 0
101 11 MONO all EVI2B 2124 3500 0.79 0.67 0.3 0 0
101 11 MONO all STAB1 23166 18628 0.78 0.51 0.16 0 0
101 11 MONO all FOSL2 2355 3798 0.78 0.57 0.19 0 0
101 11 MONO all EMP3 2014 3335 0.77 0.88 0.66 0 0
101 11 MONO all SCPEP1 59342 29507 0.77 0.54 0.12 0 0
101 11 MONO all CFD 1675 2771 0.76 0.84 0.47 0 0
101 11 MONO all CLEC12A 160364 31713 0.76 0.6 0.22 0 0