Marker Genes

Dataset: A general approach for detecting expressed mutations in AML cells using single cell RNA-sequencing

  • tissue: Bone marrow
  • ontology: Bone marrow
  • genotype: -
  • stage: Adult
  • treatment condition: AML
  • cell/nucleus: Cells
  • pmid: 31413257
  • subset name: all
  • total genes: 20090
  • clustering: Seurat
  • pseudotime: None
  • link:

Rows:100
dataset id cluster id cluster name cell type name sample id gene symbol entrez geneid species specific geneid
avg log fc (?)
pct 1 pct 2 p value padj
101 10 MEP all STMN1 3925 6510 1.11 0.93 0.5 0 0
101 10 MEP all MPO 4353 7218 1.05 0.5 0.19 4.7448338973599E-269 1.1311209527916E-264
101 10 MEP all PRTN3 5657 9495 0.87 0.22 0.05 2.3690882927942E-245 5.6476695811922E-241
101 10 MEP all PCLAF 9768 28961 0.85 0.57 0.16 0 0
101 10 MEP all MYC 4609 7553 0.83 0.67 0.23 0 0
101 10 MEP all TUBA1B 10376 18809 0.8 0.94 0.71 0 0
101 10 MEP all TYMS 7298 12441 0.75 0.56 0.15 0 0
101 10 MEP all IGLL1 3543 5870 0.75 0.59 0.16 0 0
101 10 MEP all FABP5 2171 3560 0.73 0.72 0.3 0 0
101 10 MEP all HIST1H4C 8364 4787 0.69 0.62 0.36 1.6068381368707E-123 3.830541434486E-119
101 10 MEP all TUBB 203068 20778 0.68 0.9 0.64 1.8951942551485E-276 4.5179535848485E-272
101 10 MEP all PRSS57 400668 31397 0.68 0.97 0.51 0 0
101 10 MEP all H2AFZ 3015 4741 0.68 0.91 0.69 7.0884567930601E-290 1.6898172148976E-285
101 10 MEP all DUT 1854 3078 0.67 0.89 0.58 0 0
101 10 MEP all CALR 811 1455 0.66 0.92 0.68 0 0
101 10 MEP all NUCB2 4925 8044 0.66 0.81 0.42 0 0
101 10 MEP all RP11-620J15.3 NULL 0.66 0.84 0.39 0 0
101 10 MEP all HMGN2 3151 4986 0.65 0.98 0.87 1.1356196910608E-290 2.7072037815198E-286
101 10 MEP all NPW 283869 30509 0.64 0.43 0.09 0 0
101 10 MEP all PRDX1 5052 9352 0.61 0.79 0.64 1.2495598162933E-71 2.9788256460615E-67
101 10 MEP all SOX4 6659 11200 0.61 0.81 0.38 0 0
101 10 MEP all HMGB1 3146 4983 0.61 0.98 0.85 0 0
101 10 MEP all NASP 4678 7644 0.6 0.72 0.35 0 0
101 10 MEP all SMIM24 284422 37244 0.6 0.73 0.28 0 0
101 10 MEP all HMGA1 3159 5010 0.57 0.82 0.51 1.1007488040172E-285 2.6240750738965E-281
101 10 MEP all CDCA7 83879 14628 0.57 0.52 0.12 0 0
101 10 MEP all MARCKSL1 65108 7142 0.56 0.65 0.22 0 0
101 10 MEP all CPA3 1359 2298 0.56 0.44 0.1 0 0
101 10 MEP all NCL 4691 7667 0.54 0.91 0.67 5.8762479288478E-271 1.400838743758E-266
101 10 MEP all RNASE2 6036 10045 0.54 0.49 0.28 1.8786036745137E-87 4.4784032996732E-83
101 10 MEP all BEX3 27018 13388 0.54 0.71 0.27 0 0
101 10 MEP all RAN 5901 9846 0.53 0.9 0.65 1.487220235755E-283 3.5453843200163E-279
101 10 MEP all RCC1 1104 1913 0.52 0.81 0.49 3.4943477430257E-237 8.3301755845989E-233
101 10 MEP all RANBP1 5902 9847 0.51 0.82 0.47 1.2926390625418E-282 3.0815222611933E-278
101 10 MEP all NPM1 4869 7910 0.5 0.99 0.86 0 0
101 10 MEP all ARMH1 339541 34345 0.5 0.81 0.47 7.4429070494935E-236 1.7743146115288E-231
101 10 MEP all AZU1 566 913 0.49 0.53 0.31 2.9608184639769E-102 7.0582951362744E-98
101 10 MEP all MIF 4282 7097 0.48 0.97 0.84 8.0491822750386E-290 1.9188445625465E-285
101 10 MEP all MCM3 4172 6945 0.48 0.53 0.18 0 0
101 10 MEP all CDK4 1019 1773 0.47 0.71 0.34 0 0
101 10 MEP all UHRF1 29128 12556 0.46 0.4 0.08 0 0
101 10 MEP all C1QTNF4 114900 14346 0.46 0.49 0.17 2.5579944641673E-283 6.0980030031284E-279
101 10 MEP all SNRPD1 6632 11158 0.45 0.8 0.46 3.1242258360108E-260 7.4478419704661E-256
101 10 MEP all SNRPE 6635 11161 0.45 0.78 0.42 8.9168578685235E-256 2.1256897472773E-251
101 10 MEP all HNRNPA1 3178 5031 0.45 0.99 0.9 0 0
101 10 MEP all NAP1L1 4673 7637 0.45 0.95 0.76 4.7056026298474E-228 1.1217686109293E-223
101 10 MEP all MYB 4602 7545 0.44 0.7 0.31 1.0416844487724E-273 2.4832715574285E-269
101 10 MEP all HSPD1 3329 5261 0.44 0.84 0.53 2.8847843239526E-219 6.8770373498707E-215
101 10 MEP all SERBP1 26135 17860 0.44 0.87 0.62 4.9998059253539E-215 1.1919037345451E-210
101 10 MEP all NME1 4830 7849 0.44 0.65 0.28 6.3772853655171E-294 1.5202810582856E-289
101 10 MEP all ERH 2079 3447 0.44 0.85 0.55 2.7896875021044E-235 6.6503360362667E-231
101 10 MEP all SLC40A1 30061 10909 0.44 0.55 0.29 7.9319080786395E-118 1.8908875668669E-113
101 10 MEP all HMGB2 3148 5000 0.43 0.76 0.56 1.9011730476036E-81 4.5322064281821E-77
101 10 MEP all MCM7 4176 6950 0.43 0.61 0.24 0 0
101 10 MEP all SELENOP 6414 10751 0.42 0.62 0.28 2.4509200012019E-230 5.8427481908652E-226
101 10 MEP all MDK 4192 6972 0.42 0.43 0.13 4.280503287264E-288 1.0204291786509E-283
101 10 MEP all RPS17 6218 10397 0.42 0.98 0.85 1.1506054732271E-254 2.7429283876262E-250
101 10 MEP all PCNA 5111 8729 0.42 0.5 0.18 3.0250533301337E-285 7.2114246337057E-281
101 10 MEP all XIST 7503 12810 0.42 0.57 0.25 1.239875124691E-211 2.9557383097508E-207
101 10 MEP all RPS6 6194 10429 0.42 1 0.96 0 0
101 10 MEP all RPS23 6228 10410 0.42 1 0.96 0 0
101 10 MEP all PHGDH 26227 8923 0.42 0.37 0.07 0 0
101 10 MEP all C19orf48 84798 29667 0.41 0.6 0.22 0 0
101 10 MEP all EEF1B2 1933 3208 0.41 0.99 0.91 2.81929646144E-289 6.7209208344267E-285
101 10 MEP all PARP1 142 270 0.41 0.72 0.36 2.9296315596657E-261 6.9839486750871E-257
101 10 MEP all IMPDH2 3615 6053 0.41 0.83 0.48 3.2718536766987E-215 7.799771979882E-211
101 10 MEP all RPL17 6139 10307 0.4 1 0.94 2.7953018876106E-298 6.6637201698748E-294
101 10 MEP all CDK6 1021 1777 0.4 0.86 0.48 1.4830903142008E-210 3.5355390000234E-206
101 10 MEP all CYTL1 54360 24435 0.4 0.57 0.25 4.5774995848758E-233 1.0912301260385E-228
101 10 MEP all RBBP4 5928 9887 0.4 0.81 0.54 4.5218522906206E-185 1.077964367561E-180
101 10 MEP all CKS2 1164 2000 0.4 0.64 0.28 3.0359336803812E-240 7.2373623006607E-236
101 10 MEP all FKBP4 2288 3720 0.4 0.51 0.2 5.0632306655685E-261 1.2070235583649E-256
101 10 MEP all C1QBP 708 1243 0.4 0.79 0.5 3.6069968650558E-183 8.5987198266066E-179
101 10 MEP all UNG 7374 12572 0.4 0.43 0.12 0 0
101 10 MEP all PAICS 10606 8587 0.4 0.58 0.23 8.3828471811768E-296 1.9983869395207E-291
101 10 MEP all MCM5 4174 6948 0.39 0.52 0.21 7.0930325214479E-251 1.690908022788E-246
101 10 MEP all RPS4X 6191 10424 0.39 1 0.95 1.0892288491908E-252 2.5966126535858E-248
101 10 MEP all NME4 4833 7852 0.39 0.7 0.35 4.3106072180982E-234 1.0276056547224E-229
101 10 MEP all RPL36A 6173 10359 0.39 0.99 0.93 8.3227150063082E-290 1.9840520303538E-285
101 10 MEP all RPS18 6222 10401 0.39 1 0.96 0 0
101 10 MEP all UQCRH 7388 12590 0.39 0.95 0.79 2.2760140367077E-218 5.4257898621074E-214
101 10 MEP all FCER1A 2205 3609 0.39 0.13 0.04 6.5246258636874E-80 1.5554055596444E-75
101 10 MEP all RPLP0 6175 10371 0.39 0.99 0.95 1.0600708296594E-284 2.527102850825E-280
101 10 MEP all FARSA 2193 3592 0.38 0.57 0.24 1.3768929644364E-258 3.2823751379199E-254
101 10 MEP all ENO1 2023 3350 0.38 0.91 0.76 1.3491143963696E-109 3.2161538095054E-105
101 10 MEP all NUCKS1 64710 29923 0.38 0.8 0.53 7.0219650762519E-146 1.6739662545277E-141
101 10 MEP all CEBPA 1050 1833 0.38 0.56 0.23 7.2933560752603E-250 1.7386631547813E-245
101 10 MEP all MLEC 9761 28973 0.38 0.7 0.35 7.0351752064189E-232 1.6771154174582E-227
101 10 MEP all MGST1 4257 7061 0.38 0.62 0.48 1.8733312596027E-64 4.4658343897669E-60
101 10 MEP all GATA2 2624 4171 0.38 0.54 0.25 2.3157009770059E-174 5.5203995590844E-170
101 10 MEP all APEX1 328 587 0.38 0.84 0.56 2.7893996865421E-172 6.6496499127476E-168
101 10 MEP all EBPL 84650 18061 0.38 0.8 0.44 3.7313763166752E-216 8.8952280013221E-212
101 10 MEP all CD164 8763 1632 0.37 0.87 0.64 8.3011127815082E-131 1.9789022759837E-126
101 10 MEP all CDT1 81620 24576 0.37 0.4 0.12 0 0
101 10 MEP all MCM4 4173 6947 0.37 0.41 0.11 0 0
101 10 MEP all CLEC11A 6320 10576 0.37 0.6 0.32 2.4438247071092E-147 5.8258337192776E-143
101 10 MEP all PRSS21 10942 9485 0.37 0.42 0.09 0 0
101 10 MEP all PRKDC 5591 9413 0.37 0.63 0.32 8.823736974239E-195 2.1034906572888E-190
101 10 MEP all MCM2 4171 6944 0.37 0.44 0.12 0 0
101 10 MEP all DKC1 1736 2890 0.37 0.62 0.26 4.0134494346718E-265 9.5676621073141E-261