Marker Genes

Dataset: A general approach for detecting expressed mutations in AML cells using single cell RNA-sequencing

  • tissue: Bone marrow
  • ontology: Bone marrow
  • genotype: -
  • stage: Adult
  • treatment condition: AML
  • cell/nucleus: Cells
  • pmid: 31413257
  • subset name: all
  • total genes: 20090
  • clustering: Seurat
  • pseudotime: None
  • link:

Rows:100
dataset id cluster id cluster name cell type name sample id gene symbol entrez geneid species specific geneid
avg log fc (?)
pct 1 pct 2 p value padj
101 10 MEP all STMN1 3925 6510 1.11 0.93 0.5 0 0
101 10 MEP all MPO 4353 7218 1.05 0.5 0.19 4.7448338973599e-269 1.13112095279163e-264
101 10 MEP all PRTN3 5657 9495 0.87 0.22 0.05 2.36908829279424e-245 5.64766958119219e-241
101 10 MEP all PCLAF 9768 28961 0.85 0.57 0.16 0 0
101 10 MEP all MYC 4609 7553 0.83 0.67 0.23 0 0
101 10 MEP all TUBA1B 10376 18809 0.8 0.94 0.71 0 0
101 10 MEP all TYMS 7298 12441 0.75 0.56 0.15 0 0
101 10 MEP all IGLL1 3543 5870 0.75 0.59 0.16 0 0
101 10 MEP all FABP5 2171 3560 0.73 0.72 0.3 0 0
101 10 MEP all HIST1H4C 8364 4787 0.69 0.62 0.36 1.60683813687067e-123 3.83054143448599e-119
101 10 MEP all TUBB 203068 20778 0.68 0.9 0.64 1.89519425514848e-276 4.51795358484846e-272
101 10 MEP all PRSS57 400668 31397 0.68 0.97 0.51 0 0
101 10 MEP all H2AFZ 3015 4741 0.68 0.91 0.69 7.08845679306011e-290 1.6898172148976e-285
101 10 MEP all DUT 1854 3078 0.67 0.89 0.58 0 0
101 10 MEP all CALR 811 1455 0.66 0.92 0.68 0 0
101 10 MEP all NUCB2 4925 8044 0.66 0.81 0.42 0 0
101 10 MEP all RP11-620J15.3 NULL 0.66 0.84 0.39 0 0
101 10 MEP all HMGN2 3151 4986 0.65 0.98 0.87 1.1356196910608e-290 2.70720378151984e-286
101 10 MEP all NPW 283869 30509 0.64 0.43 0.09 0 0
101 10 MEP all PRDX1 5052 9352 0.61 0.79 0.64 1.24955981629326e-71 2.9788256460615e-67
101 10 MEP all SOX4 6659 11200 0.61 0.81 0.38 0 0
101 10 MEP all HMGB1 3146 4983 0.61 0.98 0.85 0 0
101 10 MEP all NASP 4678 7644 0.6 0.72 0.35 0 0
101 10 MEP all SMIM24 284422 37244 0.6 0.73 0.28 0 0
101 10 MEP all HMGA1 3159 5010 0.57 0.82 0.51 1.10074880401717e-285 2.62407507389653e-281
101 10 MEP all CDCA7 83879 14628 0.57 0.52 0.12 0 0
101 10 MEP all MARCKSL1 65108 7142 0.56 0.65 0.22 0 0
101 10 MEP all CPA3 1359 2298 0.56 0.44 0.1 0 0
101 10 MEP all NCL 4691 7667 0.54 0.91 0.67 5.8762479288478e-271 1.40083874375803e-266
101 10 MEP all RNASE2 6036 10045 0.54 0.49 0.28 1.87860367451371e-87 4.47840329967322e-83
101 10 MEP all BEX3 27018 13388 0.54 0.71 0.27 0 0
101 10 MEP all RAN 5901 9846 0.53 0.9 0.65 1.48722023575499e-283 3.54538432001632e-279
101 10 MEP all RCC1 1104 1913 0.52 0.81 0.49 3.49434774302568e-237 8.33017558459892e-233
101 10 MEP all RANBP1 5902 9847 0.51 0.82 0.47 1.29263906254178e-282 3.08152226119334e-278
101 10 MEP all NPM1 4869 7910 0.5 0.99 0.86 0 0
101 10 MEP all ARMH1 339541 34345 0.5 0.81 0.47 7.44290704949352e-236 1.77431461152876e-231
101 10 MEP all AZU1 566 913 0.49 0.53 0.31 2.96081846397685e-102 7.0582951362744e-98
101 10 MEP all MIF 4282 7097 0.48 0.97 0.84 8.04918227503861e-290 1.91884456254645e-285
101 10 MEP all MCM3 4172 6945 0.48 0.53 0.18 0 0
101 10 MEP all CDK4 1019 1773 0.47 0.71 0.34 0 0
101 10 MEP all UHRF1 29128 12556 0.46 0.4 0.08 0 0
101 10 MEP all C1QTNF4 114900 14346 0.46 0.49 0.17 2.55799446416729e-283 6.09800300312841e-279
101 10 MEP all SNRPD1 6632 11158 0.45 0.8 0.46 3.12422583601079e-260 7.44784197046612e-256
101 10 MEP all SNRPE 6635 11161 0.45 0.78 0.42 8.91685786852353e-256 2.12568974727732e-251
101 10 MEP all HNRNPA1 3178 5031 0.45 0.99 0.9 0 0
101 10 MEP all NAP1L1 4673 7637 0.45 0.95 0.76 4.70560262984737e-228 1.12176861092931e-223
101 10 MEP all MYB 4602 7545 0.44 0.7 0.31 1.04168444877239e-273 2.48327155742849e-269
101 10 MEP all HSPD1 3329 5261 0.44 0.84 0.53 2.88478432395262e-219 6.87703734987066e-215
101 10 MEP all SERBP1 26135 17860 0.44 0.87 0.62 4.99980592535386e-215 1.19190373454511e-210
101 10 MEP all NME1 4830 7849 0.44 0.65 0.28 6.3772853655171e-294 1.52028105828562e-289
101 10 MEP all ERH 2079 3447 0.44 0.85 0.55 2.78968750210442e-235 6.65033603626674e-231
101 10 MEP all SLC40A1 30061 10909 0.44 0.55 0.29 7.9319080786395e-118 1.89088756686687e-113
101 10 MEP all HMGB2 3148 5000 0.43 0.76 0.56 1.90117304760357e-81 4.53220642818215e-77
101 10 MEP all MCM7 4176 6950 0.43 0.61 0.24 0 0
101 10 MEP all SELENOP 6414 10751 0.42 0.62 0.28 2.45092000120188e-230 5.84274819086515e-226
101 10 MEP all MDK 4192 6972 0.42 0.43 0.13 4.28050328726401e-288 1.02042917865087e-283
101 10 MEP all RPS17 6218 10397 0.42 0.98 0.85 1.15060547322715e-254 2.74292838762621e-250
101 10 MEP all PCNA 5111 8729 0.42 0.5 0.18 3.0250533301337e-285 7.21142463370572e-281
101 10 MEP all XIST 7503 12810 0.42 0.57 0.25 1.23987512469096e-211 2.95573830975078e-207
101 10 MEP all RPS6 6194 10429 0.42 1 0.96 0 0
101 10 MEP all RPS23 6228 10410 0.42 1 0.96 0 0
101 10 MEP all PHGDH 26227 8923 0.42 0.37 0.07 0 0
101 10 MEP all C19orf48 84798 29667 0.41 0.6 0.22 0 0
101 10 MEP all EEF1B2 1933 3208 0.41 0.99 0.91 2.81929646143997e-289 6.72092083442673e-285
101 10 MEP all PARP1 142 270 0.41 0.72 0.36 2.92963155966573e-261 6.98394867508714e-257
101 10 MEP all IMPDH2 3615 6053 0.41 0.83 0.48 3.27185367669868e-215 7.79977197988198e-211
101 10 MEP all RPL17 6139 10307 0.4 1 0.94 2.79530188761056e-298 6.66372016987482e-294
101 10 MEP all CDK6 1021 1777 0.4 0.86 0.48 1.48309031420084e-210 3.53553900002338e-206
101 10 MEP all CYTL1 54360 24435 0.4 0.57 0.25 4.57749958487585e-233 1.09123012603855e-228
101 10 MEP all RBBP4 5928 9887 0.4 0.81 0.54 4.52185229062055e-185 1.07796436756103e-180
101 10 MEP all CKS2 1164 2000 0.4 0.64 0.28 3.03593368038118e-240 7.2373623006607e-236
101 10 MEP all FKBP4 2288 3720 0.4 0.51 0.2 5.06323066556847e-261 1.20702355836487e-256
101 10 MEP all C1QBP 708 1243 0.4 0.79 0.5 3.60699686505584e-183 8.59871982660661e-179
101 10 MEP all UNG 7374 12572 0.4 0.43 0.12 0 0
101 10 MEP all PAICS 10606 8587 0.4 0.58 0.23 8.38284718117677e-296 1.99838693952073e-291
101 10 MEP all MCM5 4174 6948 0.39 0.52 0.21 7.09303252144787e-251 1.69090802278796e-246
101 10 MEP all RPS4X 6191 10424 0.39 1 0.95 1.08922884919075e-252 2.59661265358582e-248
101 10 MEP all NME4 4833 7852 0.39 0.7 0.35 4.31060721809821e-234 1.02760565472243e-229
101 10 MEP all RPL36A 6173 10359 0.39 0.99 0.93 8.32271500630825e-290 1.98405203035382e-285
101 10 MEP all RPS18 6222 10401 0.39 1 0.96 0 0
101 10 MEP all UQCRH 7388 12590 0.39 0.95 0.79 2.27601403670765e-218 5.42578986210736e-214
101 10 MEP all FCER1A 2205 3609 0.39 0.13 0.04 6.5246258636874e-80 1.55540555964444e-75
101 10 MEP all RPLP0 6175 10371 0.39 0.99 0.95 1.0600708296594e-284 2.52710285082504e-280
101 10 MEP all FARSA 2193 3592 0.38 0.57 0.24 1.37689296443639e-258 3.28237513791991e-254
101 10 MEP all ENO1 2023 3350 0.38 0.91 0.76 1.34911439636957e-109 3.21615380950542e-105
101 10 MEP all NUCKS1 64710 29923 0.38 0.8 0.53 7.02196507625195e-146 1.6739662545277e-141
101 10 MEP all CEBPA 1050 1833 0.38 0.56 0.23 7.29335607526028e-250 1.7386631547813e-245
101 10 MEP all MLEC 9761 28973 0.38 0.7 0.35 7.03517520641891e-232 1.6771154174582e-227
101 10 MEP all MGST1 4257 7061 0.38 0.62 0.48 1.87333125960269e-64 4.46583438976686e-60
101 10 MEP all GATA2 2624 4171 0.38 0.54 0.25 2.31570097700593e-174 5.52039955908444e-170
101 10 MEP all APEX1 328 587 0.38 0.84 0.56 2.78939968654207e-172 6.64964991274763e-168
101 10 MEP all EBPL 84650 18061 0.38 0.8 0.44 3.73137631667525e-216 8.89522800132213e-212
101 10 MEP all CD164 8763 1632 0.37 0.87 0.64 8.30111278150821e-131 1.97890227598374e-126
101 10 MEP all CDT1 81620 24576 0.37 0.4 0.12 0 0
101 10 MEP all MCM4 4173 6947 0.37 0.41 0.11 0 0
101 10 MEP all CLEC11A 6320 10576 0.37 0.6 0.32 2.44382470710918e-147 5.82583371927758e-143
101 10 MEP all PRSS21 10942 9485 0.37 0.42 0.09 0 0
101 10 MEP all PRKDC 5591 9413 0.37 0.63 0.32 8.82373697423903e-195 2.10349065728884e-190
101 10 MEP all MCM2 4171 6944 0.37 0.44 0.12 0 0
101 10 MEP all DKC1 1736 2890 0.37 0.62 0.26 4.01344943467181e-265 9.56766210731414e-261