Marker Genes

Dataset: A general approach for detecting expressed mutations in AML cells using single cell RNA-sequencing

  • tissue: Bone marrow
  • ontology: Bone marrow
  • genotype: -
  • stage: Adult
  • treatment condition: AML
  • cell/nucleus: Cells
  • pmid: 31413257
  • subset name: all
  • total genes: 20090
  • clustering: Seurat
  • pseudotime: None
  • link:

Rows:100
dataset id cluster id cluster name cell type name sample id gene symbol entrez geneid species specific geneid
avg log fc (?)
pct 1 pct 2 p value padj
101 1 B-CELL all IGKC 3514 5716 3.25 0.52 0.03 0 0
101 1 B-CELL all IGHV1-2 28474 5550 3.17 0.15 0.01 0 0
101 1 B-CELL all IGHA1 3493 5478 3.17 0.36 0.04 0 0
101 1 B-CELL all IGHV3-23 28442 5588 3.14 0.2 0.01 0 0
101 1 B-CELL all IGKV1-39 28930 5740 3.12 0.19 0.01 0 0
101 1 B-CELL all IGHG1 3500 5525 3.05 0.32 0.02 0 0
101 1 B-CELL all IGKV3-20 28912 5817 3.03 0.24 0.02 0 0
101 1 B-CELL all IGKV1-5 28299 5741 3.02 0.18 0.01 0 0
101 1 B-CELL all IGKV1D-39 28893 5756 2.97 0.16 0.009 0 0
101 1 B-CELL all IGHV4-39 28394 5651 2.9 0.12 0.008 0 0
101 1 B-CELL all IGHV3-30 28439 5591 2.88 0.15 0.005 0 0
101 1 B-CELL all IGKV3-11 28914 5815 2.88 0.22 0.02 0 0
101 1 B-CELL all IGLV2-14 28815 5888 2.85 0.2 0.02 0 0
101 1 B-CELL all IGKV3-15 28913 5816 2.83 0.17 0.01 0 0
101 1 B-CELL all IGKV3D-20 28874 5825 2.83 0.11 0.004 0 0
101 1 B-CELL all IGKV1D-33 28896 5753 2.83 0.1 0.003 0 0
101 1 B-CELL all IGLV3-1 28809 5896 2.81 0.22 0.01 0 0
101 1 B-CELL all IGLV2-8 28817 5895 2.75 0.15 0.01 0 0
101 1 B-CELL all IGLV3-10 28803 5897 2.74 0.12 0.006 0 0
101 1 B-CELL all IGKV4-1 28908 5834 2.71 0.17 0.02 0 0
101 1 B-CELL all IGKV1-33 28933 5737 2.7 0.11 0.003 0 0
101 1 B-CELL all IGHV3-21 28444 5586 2.69 0.11 0.005 0 0
101 1 B-CELL all IGKV3D-15 28875 5824 2.6 0.1 0.004 0 0
101 1 B-CELL all IGHV4-61 28391 5655 2.59 0.1 0.005 0 0
101 1 B-CELL all IGKV1-17 28937 5733 2.58 0.11 0.006 0 0
101 1 B-CELL all MS4A1 931 7315 2.57 0.7 0.01 0 0
101 1 B-CELL all IGLC2 3538 5856 2.57 0.3 0.01 0 0
101 1 B-CELL all IGHV5-51 28388 5659 2.57 0.1 0.007 0 0
101 1 B-CELL all IGHV4-59 28392 5654 2.51 0.11 0.01 3.90193866817874e-298 9.30183159107129e-294
101 1 B-CELL all IGLC3 3539 5857 2.45 0.29 0.01 0 0
101 1 B-CELL all IGLV3-21 28796 5905 2.43 0.19 0.02 0 0
101 1 B-CELL all IGHG4 3503 5528 2.39 0.17 0.007 0 0
101 1 B-CELL all IGKV1-9 28941 5744 2.39 0.12 0.004 0 0
101 1 B-CELL all IGLV3-25 28793 5908 2.38 0.12 0.009 0 0
101 1 B-CELL all IGHV1-18 28468 5549 2.38 0.1 0.005 0 0
101 1 B-CELL all IGHG3 3502 5527 2.37 0.26 0.008 0 0
101 1 B-CELL all IGKV1-12 28940 5730 2.36 0.25 0.01 0 0
101 1 B-CELL all CD79A 973 1698 2.34 0.86 0.03 0 0
101 1 B-CELL all IGHV3-7 28452 5620 2.32 0.16 0.01 0 0
101 1 B-CELL all JCHAIN 3512 5713 2.31 0.35 0.05 0 0
101 1 B-CELL all IGHG2 3501 5526 2.31 0.25 0.01 0 0
101 1 B-CELL all IGKV3D-11 28876 5823 2.28 0.1 0.005 0 0
101 1 B-CELL all IGLL5 100423062 38476 2.26 0.41 0.009 0 0
101 1 B-CELL all IGLV2-23 28813 5890 2.25 0.13 0.02 1.20932657493485e-160 2.8829136219872e-156
101 1 B-CELL all IGLV1-44 28823 5879 2.22 0.13 0.01 0 0
101 1 B-CELL all IGHV3-53 28420 5610 2.2 0.11 0.004 0 0
101 1 B-CELL all IGLV1-40 28825 5877 2.18 0.15 0.01 0 0
101 1 B-CELL all IGHM 3507 5541 2.15 0.59 0.09 0 0
101 1 B-CELL all IGLV2-11 28816 5887 2.06 0.1 0.006 0 0
101 1 B-CELL all IGHV3-33 28434 5596 1.99 0.1 0.003 0 0
101 1 B-CELL all IGKV1-8 28942 5743 1.96 0.1 0.002 0 0
101 1 B-CELL all IGHV3-11 28450 5580 1.89 0.11 0.004 0 0
101 1 B-CELL all IGLV6-57 28778 5927 1.79 0.12 0.008 0 0
101 1 B-CELL all IGKV1-27 28935 5735 1.79 0.1 0.008 0 0
101 1 B-CELL all LINC00926 283663 27514 1.78 0.55 0.02 0 0
101 1 B-CELL all CD79B 974 1699 1.7 0.73 0.13 0 0
101 1 B-CELL all MZB1 51237 30125 1.65 0.4 0.16 1.66257328385047e-209 3.96340845137114e-205
101 1 B-CELL all IGHGP 3505 5529 1.59 0.14 0.004 0 0
101 1 B-CELL all NIBAN3 199786 24130 1.59 0.48 0.008 0 0
101 1 B-CELL all HLA-DQA1 3117 4942 1.54 0.71 0.28 0 0
101 1 B-CELL all IGHA2 3494 5479 1.47 0.16 0.007 0 0
101 1 B-CELL all FCER2 2208 3612 1.42 0.43 0.06 0 0
101 1 B-CELL all BANK1 55024 18233 1.35 0.46 0.04 0 0
101 1 B-CELL all CD74 972 1697 1.32 0.98 0.8 0 0
101 1 B-CELL all STAG3 10734 11356 1.29 0.27 0.01 0 0
101 1 B-CELL all TCL1A 8115 11648 1.23 0.28 0.002 0 0
101 1 B-CELL all LTB 4050 6711 1.22 0.67 0.32 0 0
101 1 B-CELL all CD37 951 1666 1.2 0.85 0.82 4.0658082697793e-236 9.69248033432686e-232
101 1 B-CELL all RALGPS2 55103 30279 1.2 0.49 0.09 0 0
101 1 B-CELL all FCRL1 115350 18509 1.17 0.33 0.002 0 0
101 1 B-CELL all HVCN1 84329 28240 1.14 0.4 0.09 0 0
101 1 B-CELL all IGHD 3495 5480 1.14 0.27 0.02 0 0
101 1 B-CELL all CXCR4 7852 2561 1.14 0.72 0.32 0 0
101 1 B-CELL all FCMR 9214 14315 1.12 0.45 0.09 0 0
101 1 B-CELL all ARHGAP24 83478 25361 1.11 0.36 0.03 0 0
101 1 B-CELL all POU2AF1 5450 9211 1.11 0.51 0.007 0 0
101 1 B-CELL all AFF3 3899 6473 1.07 0.36 0.1 0 0
101 1 B-CELL all VPREB3 29802 12710 1.06 0.35 0.002 0 0
101 1 B-CELL all CD19 930 1633 1.06 0.41 0.009 0 0
101 1 B-CELL all BLK 640 1057 1.05 0.35 0.003 0 0
101 1 B-CELL all HLA-DQB1 3119 4944 1.03 0.61 0.32 5.92382931614284e-237 1.41218167067529e-232
101 1 B-CELL all HLA-DRB1 3123 4948 1 0.78 0.57 2.27127284781079e-234 5.41448734189615e-230
101 1 B-CELL all DERL3 91319 14236 1 0.33 0.07 0 0
101 1 B-CELL all SSR4 6748 11326 0.99 0.58 0.74 1.79618429119328e-10 4.28192373177565e-06
101 1 B-CELL all CD40 958 11919 0.98 0.37 0.02 0 0
101 1 B-CELL all TXNIP 10628 16952 0.98 0.91 0.79 3.07508794289494e-206 7.33070214706725e-202
101 1 B-CELL all NCF1 653361 7660 0.96 0.77 0.25 0 0
101 1 B-CELL all CD22 933 1643 0.96 0.29 0.01 0 0
101 1 B-CELL all IL4R 3566 6015 0.96 0.27 0.11 3.01749646513655e-120 7.19340982323901e-116
101 1 B-CELL all HERPUD1 9709 13744 0.96 0.55 0.31 7.47495195449819e-184 1.78195379643282e-179
101 1 B-CELL all BIRC3 330 591 0.93 0.38 0.08 0 0
101 1 B-CELL all SPIB 6689 11242 0.93 0.27 0.01 0 0
101 1 B-CELL all ISG20 3669 6130 0.92 0.58 0.14 0 0
101 1 B-CELL all HLA-DRB5 3127 4953 0.92 0.73 0.51 1.11259944793947e-198 2.65232582394291e-194
101 1 B-CELL all PLPP5 84513 25026 0.91 0.48 0.15 0 0
101 1 B-CELL all FCRLA 84824 18504 0.9 0.28 0.003 0 0
101 1 B-CELL all ZFP36L1 677 1107 0.89 0.59 0.25 8.86371332444512e-244 2.11302061941447e-239
101 1 B-CELL all CD52 1043 1804 0.88 0.76 0.71 1.35018953508554e-162 3.21871683269043e-158
101 1 B-CELL all BACH2 60468 14078 0.88 0.25 0.05 4.58569331775156e-296 1.09318343001879e-291
101 1 B-CELL all ADAM28 10863 206 0.87 0.4 0.2 7.10200581043201e-132 1.69304716514889e-127