Marker Genes
Dataset: Single-Cell Transcriptomics of a Human Kidney Allograft Biopsy Specimen Defines a Diverse Inflammatory Response
- tissue: Kidney epithelium
- ontology: Kidney epithelium
- genotype: WT
- stage: Adult
- treatment condition: Healthy
- cell/nucleus: Nuclei
- pmid: 29980650
- subset name: allograft
- total genes: Not reported
- clustering: Seurat
- pseudotime: Monocle
- link: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE114156
Rows:16
| dataset id | cluster id | cluster name | cell type name | sample id | |
|---|---|---|---|---|---|
| 40 | 6 | B cells | B cells | allograft | Details |
| 40 | 3 | CD | Collecting duct | allograft | Details |
| 40 | 15 | Cycling cells | Cycling cells | allograft | Details |
| 40 | 14 | EC | Endothelial cells | allograft | Details |
| 40 | 11 | Fibroblast | Fibroblast | allograft | Details |
| 40 | 2 | LOH (AL) | Loop of Henle (ascending limb) | allograft | Details |
| 40 | 1 | LOH (DL) | Loop of Henle (distal limb) | allograft | Details |
| 40 | 13 | Mast cells | Mast cells | allograft | Details |
| 40 | 4 | Mono1 | Monocytes | allograft | Details |
| 40 | 5 | Mono2 | Monocytes | allograft | Details |
| 40 | 12 | Myofibroblast | Myofibroblast | allograft | Details |
| 40 | 10 | Pericyte | Pericyte | allograft | Details |
| 40 | 8 | Plasma1 | Plasma cells | allograft | Details |
| 40 | 9 | Plasma2 | Plasma cells | allograft | Details |
| 40 | 0 | PT | Proximal tubule | allograft | Details |
| 40 | 7 | T cells | T cells | allograft | Details |