Marker Genes
Dataset: Single-Cell Transcriptomics of a Human Kidney Allograft Biopsy Specimen Defines a Diverse Inflammatory Response
- tissue: Kidney epithelium
- ontology: Kidney epithelium
- genotype: WT
- stage: Adult
- treatment condition: Healthy
- cell/nucleus: Nuclei
- pmid: 29980650
- subset name: healthy
- total genes: Not reported
- clustering: Seurat
- pseudotime: Monocle
- link: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE114156
Rows:16
| dataset id | cluster id | cluster name | cell type name | sample id | |
|---|---|---|---|---|---|
| 39 | 6 | B cells | B cells | healthy | Details |
| 39 | 3 | CD | Collecting duct | healthy | Details |
| 39 | 15 | Cycling cells | Cycling cells | healthy | Details |
| 39 | 14 | EC | Endothelial cells | healthy | Details |
| 39 | 11 | Fibroblast | Fibroblast | healthy | Details |
| 39 | 2 | LOH (AL) | Loop of Henle (ascending limb) | healthy | Details |
| 39 | 1 | LOH (DL) | Loop of Henle (distal limb) | healthy | Details |
| 39 | 13 | Mast cells | Mast cells | healthy | Details |
| 39 | 4 | Mono1 | Monocytes | healthy | Details |
| 39 | 5 | Mono2 | Monocytes | healthy | Details |
| 39 | 12 | Myofibroblast | Myofibroblast | healthy | Details |
| 39 | 10 | Pericyte | Pericyte | healthy | Details |
| 39 | 8 | Plasma1 | Plasma cells | healthy | Details |
| 39 | 9 | Plasma2 | Plasma cells | healthy | Details |
| 39 | 0 | PT | Proximal tubule | healthy | Details |
| 39 | 7 | T cells | T cells | healthy | Details |