Analyze your own scRNA-seq data

FlyPhone Analysis Pipeline

Steps

  1. Complete Form
    Upload scRNA-seq matrix and metadata files
  2. Click "Run Analysis"
  3. When analysys is done, we'll email a link with results

Hints

  • Metadata file must have a column labeled "celltype" (see example metadata file)
  • Comma separated files only
  • Use genenames (eg: csw, wg, indy) as identifiers (not FBgns)
  • Less than 40 clusters
  • Cell type names should be free of special characters like "/" or "+"
  • You should recieve an email with results within 24 hours

Example matrix:


Example metadata:
- Please avoid special characters such as "/ ? +" in the metadata file


Note: Uploading large files may take a few minutes