» Search by gene
To find CRISPRs within a gene, enter the gene symbol, select tracks of interest, then click the 'Submit' button.
» Search by sequence
If you have a sequence and want to find nearby CRISPRs, enter the sequence into the textbox to BLAST it before viewing it on JBrowse. If the sequence is a significant hit, it will show as a highlight.
Both search functions will take you to a summary page with a table and embedded JBrowse view. If you want
to zoom in or shift the location on the genome, click on "Full-screen view".
Miss the old version? Find CRISPRs 2017.
Publication Citation: Benjamin E Housden, Alexander J Valvezan, Colleen Kelley, Richelle Sopko, Yanhui Hu, Charles Roesel, Shuailiang Lin, Michael Buckner, Rong Tao, Bahar Yilmazel, Stephanie E Mohr, Brendan D Manning, and Norbert Perrimon. 2015. “ Identification of potential drug targets for tuberous sclerosis complex by synthetic screens combining CRISPR-based knockouts with RNAi..” Sci Signal, 393, 8: rs9.
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