Sample Format For Input File Containing Both Active and Inactive siRNAs:

si/shRNA identifier si/shRNA sequence   Phenotype
Bcl2_1278_sas	ATTGGATGTGCTTTGCATTCTT	1 (can also be "YES", "Y", "TRUE", "T") the program is NOT case sensitive
Bcl2_1279_sas	TATTGGATGTGCTTTGCATTCT	0 (can also be "NO", "N", "FALSE", "F")
Bcl2_128_sas	GCGCACCCTTTCTCCTCCTCCG	0
Bcl2_1280_sas	TTATTGGATGTGCTTTGCATTC	1
Bcl2_1281_sas	TTTATTGGATGTGCTTTGCATT	0
Bcl2_1282_sas	TTTTATTGGATGTGCTTTGCAT	0
Bcl2_1283_sas	CTTTTATTGGATGTGCTTTGCA	0
Bcl2_1284_sas	TCTTTTATTGGATGTGCTTTGC	0
Bcl2_1285_sas	CTCTTTTATTGGATGTGCTTTG	1
Bcl2_1286_sas	GCTCTTTTATTGGATGTGCTTT	1
Bcl2_1287_sas	AGCTCTTTTATTGGATGTGCTT	0
Bcl2_1288_sas	CAGCTCTTTTATTGGATGTGCT	0
Bcl2_1289_sas	CCAGCTCTTTTATTGGATGTGC	0
Bcl2_129_sas	TGCGCACCCTTTCTCCTCCTCC	1
Bcl2_1290_sas	TCCAGCTCTTTTATTGGATGTG	0
Bcl2_1291_sas	ATCCAGCTCTTTTATTGGATGT	0
Bcl2_1292_sas	AATCCAGCTCTTTTATTGGATG	0
Bcl2_1293_sas	TAATCCAGCTCTTTTATTGGAT	0
Bcl2_1294_sas	ATAATCCAGCTCTTTTATTGGA	0


Sample Format For Input File Containing Only Active siRNAs:

si/shRNA identifier si/shRNA sequence
v2HS_220955	TAATGAAGGGAGGATTCATGCA
v2HS_275288	TTTCAATTCAGTTCAATCTGGT
v2HS_132405	TTTAGGGATTTGAGAGTCTCCC
v2HS_57787	GAACAAGATCACTTTGTACGCT
v2HS_207697	TTGCAGTTGGAGGAAATTTGGT
v2HS_131346	TTTCATGATAAAGTCATAGGCA
v2HS_184092	ATCAAATCAGGGTGGATGTGGG
v2HS_275690	ATACACGGTGAGGTAGAAACGG
v2HS_205781	TTTCTATCAAAGAATAATACCG
v2HS_177908	TTCAAATATGCACATCAAAGCT
v2HS_133998	TTTGTAGATGGGTGGCTTTCGG
v2HS_132427	AATTTGTCCCAAGATATTGGCT
v2HS_71496	ATAAGGTGGGTCAATACAGTGA
v2HS_253909	AAGAGAAGGGAGGTGAGTTGGT
v2HS_72006	AATTTCTGCAAGATACTCTCTG
v2HS_200160	TAACAGTGACCCAGAATTACCG
v2HS_33583	ATAGAACATCCCATGAAGTCCG
v2HS_249308	ATCAGCTCACACTTCTGGGCGT
v2HS_198822	TAATTGTAGGCATTATACTTCT
v2HS_139602	TACACAGATGATGTCTCTACGC