DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG42514 and rtet

DIOPT Version :9

Sequence 1:NP_730171.1 Gene:CG42514 / 8674108 FlyBaseID:FBgn0260388 Length:533 Species:Drosophila melanogaster
Sequence 2:NP_524429.1 Gene:rtet / 42500 FlyBaseID:FBgn0028468 Length:477 Species:Drosophila melanogaster


Alignment Length:492 Identity:92/492 - (18%)
Similarity:172/492 - (34%) Gaps:138/492 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 AHSENAAQRRNSRSSENSEDNENSASGTVREQRDEAAGRTVLQWAWHVVKSTSVEPTMFLYMFAF 70
            :||:..:...|:..:.:.|.:||...    |:.|.......:...:.::..|.:.|         
  Fly    18 SHSQTGSHHHNNNKALDKEASENGKP----EKSDPMIYIIFVSLLFDLLAFTIILP--------- 69

  Fly    71 MITSVVEQNFFLYKSCRVNRNFTEEICRNLNKPENEEFRTKAMLTN--AWFLQWENISAHVFPII 133
            ::.|::|.    |:                   :|:.....|:||:  .||.|..........::
  Fly    70 LLPSLLEH----YR-------------------QNDSSGLYAVLTDRVRWFQQLLGAPDRYISVL 111

  Fly   134 LALFLGS---------------FSDRRGRKLPLLMGLVGKFFYSTMIVVNARMTTWPVQNIIYSA 183
            ...||||               .||..||| |:|:........|.:|        |...:.....
  Fly   112 FGGFLGSMFSFLQFVASPIVGGLSDYYGRK-PVLLACASGIALSYLI--------WACSSNFALF 167

  Fly   184 TLPSALTGADVAIFASCFAYISDISSLQQRTIRVTILDVIYLSAMPMGVALGSHLFYNVFNQSYA 248
            .|...:.|......:.|.:.|:|:||::.|...:.::.|.:.....:|..:|:  .:.:|:....
  Fly   168 VLARFVGGISKGNISLCMSVITDVSSVKTRGRGMALVGVAFSLGFIVGPMIGA--LFAIFSDKSG 230

  Fly   249 DMFTVNASLLALA-----IIYTLCALKWQTTPRQRSLRELGCCGFWG-DFFDKQHVKDSLAVLVK 307
            ..:.|..||||..     ::...|.|: :|.|:::.::|:.....:| ...:...:....|:...
  Fly   231 STWFVLPSLLAFGLAVGDLVVLACCLR-ETLPKEKRVKEISSALSYGLQLLNFSAIFRFAAIKNV 294

  Fly   308 PRKGHRRSFLIILLVSMALYTFQRDEGQYLYMYTLGKFDWDVSAYSNF--------KTFKSSAYV 364
            |:|.      |..|.|:.|..|     .||::|:..:|......|..|        |.|.::..:
  Fly   295 PKKD------IAALRSIGLVYF-----LYLFLYSGLEFTVTFLMYHKFGYTSMDQAKMFLTTGVI 348

  Fly   365 IAMLLAVPLMN----KILGWRDTTIIFIGTWAHSIARLFFYFATNTDLLYAG----------AVV 415
            :.:|....:..    ||.|:...::..|..     |.:....|..:.:||||          ||.
  Fly   349 MTLLQGSVVRRLPEAKIKGYAIFSLYLIVP-----AFVVVGLAEGSRMLYAGMTLFAISTAFAVT 408

  Fly   416 C-----------------------------SLGPIVG 423
            |                             :|||:||
  Fly   409 CLTTLVSKYGNDDQKGSVLGIFRSLGALARALGPVVG 445

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG42514NP_730171.1 MFS_1 129..458 CDD:284993 72/367 (20%)
MFS 132..495 CDD:119392 72/364 (20%)
rtetNP_524429.1 MFS 105..466 CDD:119392 72/369 (20%)
MFS_1 108..442 CDD:284993 68/361 (19%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
10.910

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