DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG42556 and mmadhca

DIOPT Version :10

Sequence 1:NP_001162994.1 Gene:CG42556 / 8674031 FlyBaseID:FBgn0260758 Length:257 Species:Drosophila melanogaster
Sequence 2:NP_001002453.1 Gene:mmadhca / 436726 ZFINID:ZDB-GENE-040718-152 Length:291 Species:Danio rerio


Alignment Length:285 Identity:53/285 - (18%)
Similarity:98/285 - (34%) Gaps:99/285 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly    25 SSGS----------SSFPELAFFDD-LDDMEPEDEEGVMNHQYPILHSRHSDLFYMPNCVGPAYQ 78
            ||||          ::.|...:.|: :....|:|:.                 |.:|..||    
Zfish    36 SSGSDEPYIAVPSQNTGPRTVWPDEAMGPFGPQDQR-----------------FQLPGNVG---- 79

  Fly    79 GLISSLDQPYTTDCYMADEQTLVKENDSIHDTILESLVAPT------------------------ 119
                       .||::  :.|.::.:..:|.|:.:.|..|:                        
Zfish    80 -----------FDCHL--KGTELQMSGPVHKTVPDVLSVPSSTERHEFILAQFINEFQGKEASVA 131

  Fly   120 ----------------EMCVVACPKLLLTYMRRLFQHPYARFGSSMNFSMIGLRFKD----KDAN 164
                            |..:.:||:||...:...|  |..   .:...:::.:..|:    :|..
Zfish   132 VQRVSKAELYFSQSDVECSMRSCPELLKKELELFF--PVL---PTSPITVVTVMQKNQELTRDQE 191

  Fly   165 KALTSFVHFASYNSREIMDNGYWADFINPLTGRAYY--RAAHCIRKQGLEAQLLGRGLNLTFANG 227
            :.|.:||..|......:...||||||||||:|:|::  :....|.:|.::..   .|.::.....
Zfish   192 ELLDNFVSGAKEICFTLWRGGYWADFINPLSGKAFFAVQTPDSILQQDVQHH---AGFHIEDLAS 253

  Fly   228 CTIIGEEQSDQLTGFIFTDTPCKVL 252
            ||:|...........:.|:.|...|
Zfish   254 CTVIRHVLKGTFVLTLITNAPSNSL 278

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG42556NP_001162994.1 MMADHC <96..248 CDD:431154 37/197 (19%)
mmadhcaNP_001002453.1 MMADHC 24..284 CDD:431154 53/285 (19%)

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