DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG42556 and mmadhcb

DIOPT Version :9

Sequence 1:NP_001162994.1 Gene:CG42556 / 8674031 FlyBaseID:FBgn0260758 Length:257 Species:Drosophila melanogaster
Sequence 2:NP_991157.2 Gene:mmadhcb / 402886 ZFINID:ZDB-GENE-040704-50 Length:297 Species:Danio rerio


Alignment Length:302 Identity:63/302 - (20%)
Similarity:104/302 - (34%) Gaps:86/302 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 LRTVIQGLSTRHGQIISHIRRSSGSSSFPELAFFDDLDDME-----PEDEEGVMNHQYPILHSRH 63
            |.|.:.||.....:::. .|..||:|...|........|:.     |::..|....|        
Zfish    11 LVTYLPGLHVLVHRVVG-ARSFSGASGSDEPHLNTSTPDIAPRTVWPDESMGPFGPQ-------- 66

  Fly    64 SDLFYMPNCVGPAYQGLISSLDQPYTTDCY--MADEQTLVKENDSIHDTILESLV---------- 116
            ...|.:|..||  :...:.|..:..||..:  |.|..| .:.|:..||.||...:          
Zfish    67 DKRFQLPGNVG--FDCHLESPVEQRTTSVHSVMPDVLT-AQSNNQRHDFILAQFINELHEDDKTS 128

  Fly   117 --------------APTEMCVVACPKLLLTYMRRLFQHPYARFGSS-MNFSMIGLRFK------- 159
                          :..|..:.:||:||    :|.|:..:....|: |....:..|.:       
Zfish   129 TAQNMDKAEQFFDHSSVECAIQSCPELL----KRDFESMFPEAPSTGMMVVTVTQRTQNDMTAWT 189

  Fly   160 ---DKDANKALTSFVHFASYNSREIMDNGYWADFINPLTGRAYY-------------RAAHCIRK 208
               |::..:.|..|:..|......:.:.|:|||||:|.:|.||:             |..|.   
Zfish   190 EQVDQEREELLAKFIEGAKEICHALRNEGFWADFIDPSSGLAYFGSYTNNTLFETDDRYRHL--- 251

  Fly   209 QGLEAQLLGRGLNLTFANGCTIIGEEQ--SDQLTGFIFTDTP 248
             |.:.:.||         .|.:|....  :....|.:||..|
Zfish   252 -GFQIEDLG---------CCKVIRHVMWGTHAFVGTLFTSAP 283

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG42556NP_001162994.1 DUF2246 <117..248 CDD:287231 34/156 (22%)
mmadhcbNP_991157.2 DUF2246 24..293 CDD:287231 59/289 (20%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1363001at2759
OrthoFinder 1 1.000 - - FOG0006544
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_105788
Panther 1 1.100 - - LDO PTHR13192
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
44.010

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