DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG42495 and TMEM42

DIOPT Version :10

Sequence 1:NP_001163464.1 Gene:CG42495 / 8674004 FlyBaseID:FBgn0260027 Length:142 Species:Drosophila melanogaster
Sequence 2:NP_653239.1 Gene:TMEM42 / 131616 HGNCID:28444 Length:159 Species:Homo sapiens


Alignment Length:114 Identity:31/114 - (27%)
Similarity:50/114 - (43%) Gaps:17/114 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly    11 LVAGSFAAAGSFFGKLPSHLSAQKLLNTSQINEDFSYLEIALLQLLPLVLMVTCNVCNLRFFLKA 75
            |.||:|.|..:         ::.||...|:::..        |.:|.:::|.:.|.....||.:.
Human    44 LCAGAFGALAA---------ASAKLAFGSEVSMG--------LCVLGIIVMASTNSLMWTFFSRG 91

  Fly    76 LQMTEQTLTCVVLTAASNYVLSFVLGALVYREPLTVLSGIGITLILAGL 124
            |..:..:....|....||.:.|..||.::|.|...||...|:.|||.||
Human    92 LSFSMSSAIASVTVTFSNILSSAFLGYVLYGECQEVLWWGGVFLILCGL 140

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG42495NP_001163464.1 TMEM234 <71..127 CDD:481150 19/54 (35%)
TMEM42NP_653239.1 None

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