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Protein Alignment MAP1LC3B and Atg8a

DIOPT Version :9

Sequence 1:	NP_073729.1	Gene:	MAP1LC3B / 81631	HGNCID:	13352	Length:	125	Species:	Homo sapiens
Sequence 2:	NP_727447.1	Gene:	Atg8a / 32001	FlyBaseID:	FBgn0052672	Length:	121	Species:	Drosophila melanogaster

Alignment Length:	115	Identity:	36/115 - (31%)
Similarity:	66/115 - (57%)	Gaps:	2/115 - (1%)

- Green bases have known domain annotations that are detailed below.

Human     7 FKQRRTFEQRVEDVRLIREQHPTKIPVIIERYKGEKQLPVLDKTKFLVPDHVNMSELIKIIRRRL 71
            :|:...||:|..:...||.::|.::|||:|: ..:.::..|||.|:|||..:.:.:...:||:|:
  Fly     5 YKEEHAFEKRRAEGDKIRRKYPDRVPVIVEK-APKARIGDLDKKKYLVPSDLTVGQFYFLIRKRI 68

Human    72 QLNANQAFFLLVNGHSMVSVSTPISEVYESEKDEDGFLYMVYASQETFGM 121
            .|....|.|..|| :.:...|..:..:|:...:||.|||:.|:.:..:||
  Fly    69 HLRPEDALFFFVN-NVIPPTSATMGSLYQEHHEEDYFLYIAYSDENVYGM 117

Known Domains:

Indicated by green bases in alignment.

Gene	Sequence	Domain	Region	External ID	Identity
MAP1LC3B	NP_073729.1	Ubl_ATG8_MAP1LC3B	5..119	CDD:340755	34/111 (31%)
Atg8a	NP_727447.1	Ubl_ATG8_GABARAP	2..116	CDD:340752	34/112 (30%)

Information from Original Tools:

Software error:

Can't use an undefined value as an ARRAY reference at /www/www.flyrnai.org/docroot/cgi-bin/DRSC_prot_align.pl line 1034.

For help, please send mail to the webmaster (ritg@hms.harvard.edu), giving this error message and the time and date of the error.

Tool	Simple Score	Weighted Score	Original Tool Information
Tool	Simple Score	Weighted Score	BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-
Hieranoid	0	0.000	Not matched by this tool.