DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG42402 and Mayo

DIOPT Version :10

Sequence 1:NP_001287642.1 Gene:CG42402 / 7354470 FlyBaseID:FBgn0259821 Length:747 Species:Drosophila melanogaster
Sequence 2:NP_651842.3 Gene:Mayo / 43678 FlyBaseID:FBgn0039818 Length:802 Species:Drosophila melanogaster


Alignment Length:501 Identity:91/501 - (18%)
Similarity:153/501 - (30%) Gaps:150/501 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly   191 SLLQTVVEACQKKKHCKFHGSPEFYGQGSSGVGDSSGTSSYHSSTASSNAISNDPCPKRKKIVEV 255
            :|:..:..||.|:......                :||..|......:   |:|...:...:...
  Fly    14 ALVSPIYSACPKENQMCLR----------------NGTFQYCDGEERN---SSDELMQTHLVYCT 59

  Fly   256 AYKCRPYEFRSKVACHNDVAQLECNPYSRIAVYSASF---------------------GRTEYES 299
            :..|.|.||:......|.......|.:.|..:...:.                     .|..:||
  Fly    60 SMFCEPEEFQHDYITRNHDQTPHQNKWKRARIGERATLHDVCLLRNGMPVTRECRVKDNRANWES 124

  Fly   300 IQCPQPQGVREETCLASYATETVM--------QICHGRRRCN----------------------- 333
            .:...|     ..||..:...|:.        .:..||||.|                       
  Fly   125 TEHWDP-----VVCLRRFREHTISGDLNSLHDDVLEGRRRTNDTQGRREMTGIMRNMFRQRGGNL 184

  Fly   334 LAADAN----TFGSPCQPNSRMYLKVVYTCVPKQVLK-ENKALEVEA---------DESEDFGGD 384
            |.||.:    .||:..|.:....:.|....|.|:::. ::|.|.:.|         .:.|.:   
  Fly   185 LPADVHMTGQMFGALMQQDKDATVSVDLVSVCKEIMSCDSKVLRLSAQLNATNSLLSQFESY--- 246

  Fly   385 LNDLYDDELIYKE--SEAIPKLYSN----TTTTVRQNGTRSLGL------GFSVNSANNQSITNS 437
             .|...::|:.|:  .:.:.|..|:    .||.|.......:|:      ..||..||.:....:
  Fly   247 -MDALPEQLVPKDRCGKVVAKPTSDEAETATTGVETYNFSDIGVQALITGNISVFFANPECDRIT 310

  Fly   438 SLVV---EGDRSDVNP------VMTHSADLSLEEDQERLYFYLLALVSLGVLISIVIFGTRIALQ 493
            .|.:   .||:...:.      .:..|.||:..:::..|  ...|.:...:...:...|....:.
  Fly   311 GLAIFSAPGDQRKTSASGFWYRFIRFSEDLAKVKEESNL--ETAAFLPENLWRQVKSRGATYLIF 373

  Fly   494 KHH----LVTETLSSSFAKTTRRVEETTIPSGLNDTISEIDAEIDLKTTLPLPNLSNKENYLTYA 554
            |.:    |..||......|...:|...:||...::.:|           ||||.|...||.    
  Fly   374 KVYAHDALFVETSLQRTRKPRSKVISISIPGLRSNYLS-----------LPLPFLLRNENL---- 423

  Fly   555 PTSSLYADLPRNQLVSACSQGSAAG----QIGKPHIVGTRQSPDLI 596
                      ||....|.|.||..|    :......|.|..|.||:
  Fly   424 ----------RNPDSKAFSIGSGCGYWNYETWSTEGVSTESSSDLL 459

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG42402NP_001287642.1 Gal_Rha_Lectin 51..261 CDD:459238 10/69 (14%)
Gal_Rha_Lectin_EVA1_EVA1C_rpt2 264..361 CDD:438686 23/152 (15%)
MayoNP_651842.3 7tmB2_Adhesion 498..766 CDD:320168
TM helix 1 500..525 CDD:320168
TM helix 2 535..557 CDD:320168
TM helix 3 574..600 CDD:320168
TM helix 4 615..635 CDD:320168
TM helix 5 659..688 CDD:320168
TM helix 6 704..730 CDD:320168
TM helix 7 734..759 CDD:320168
Blue background indicates that the domain is not in the aligned region.

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