DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG42402 and Cirl

DIOPT Version :10

Sequence 1:NP_001287642.1 Gene:CG42402 / 7354470 FlyBaseID:FBgn0259821 Length:747 Species:Drosophila melanogaster
Sequence 2:NP_001260807.1 Gene:Cirl / 35846 FlyBaseID:FBgn0033313 Length:1711 Species:Drosophila melanogaster


Alignment Length:512 Identity:90/512 - (17%)
Similarity:152/512 - (29%) Gaps:200/512 - (39%)


- Green bases have known domain annotations that are detailed below.


  Fly   263 EFRSKVACHNDVAQLECNPYSRIAVYSASFGRTEYESIQCPQPQGVR-EETCLASYATETVMQIC 326
            ::::..||......:||:|...|.:..|::||  :....|.....|. ...|:...:...:...|
  Fly    19 KYQTAYACEGKKLTIECDPGDVINLIRANYGR--FSITICNDHGNVEWSVNCMFPKSLSVLNSRC 81

  Fly   327 HGRRRCNLAADANTFGSPCQPNSRMYLKVVYTCV--------------PKQVLKENKALEVEADE 377
            ..::.|.:.|..:.||.|| |.:..||:..|.|:              |..||...         
  Fly    82 AHKQSCGVLAATSMFGDPC-PGTHKYLEAHYQCISAAQTSTTTNRPSPPPWVLSNG--------- 136

  Fly   378 SEDFGGDLNDLYDDELIYKESEAIPKLYSNTTTTVRQNGTRSLGLGFS-----------VNSANN 431
                                    |.::.|.:..:...|   :|.|..           |..:.|
  Fly   137 ------------------------PPIFGNGSGLIHPPG---VGAGAPPPPRLPTLPGVVGISGN 174

  Fly   432 QSITNSSLVVEGDRSDVNP---VMTHSADLSLEEDQERLYFYLLALVSLGVLISIVIFGTRIALQ 493
            ..:.|           |.|   .:|||...|             :..::|        |.|    
  Fly   175 PGLFN-----------VPPQHTAVTHSTPSS-------------STTAVG--------GGR---- 203

  Fly   494 KHHLVTETLSSSFAKTTRRVEETTIPSGLNDTISEIDAEIDLKTTLPLPNLSNKENYL---TYAP 555
                    |......||    .|..|:|.:|.:.            |.|.|.:..|:.   |.:|
  Fly   204 --------LKGGATSTT----TTKHPAGRHDGLP------------PPPQLHHHHNHHGEDTASP 244

  Fly   556 TSSLYADLPRNQLVSACSQGSAAGQIGKPHIVGTRQSPDLIGITQGPFVTTSMASLGGQGPMAAM 620
            |.      |.::|        .||                 |....|..|..:..:||.|.....
  Fly   245 TK------PSSKL--------PAG-----------------GNATSPSNTRILTGVGGSGTDDGT 278

  Fly   621 VTSAIVIGDSTPNSSSLGAMIPITQYTTAPTIRGGYVISADNMGVIQRANNTPTPLNL----LSG 681
            :.:.....:..|.:::.|:::|                  .|..|::..||    :||    :||
  Fly   279 LLTTKSSPNRPPGTAASGSVVP------------------GNGSVVRTINN----INLNAAGMSG 321

  Fly   682 STPEQPPQAGP---------IISAAGMTVTPQAHGGASNLRRVKPPFLQ--PQLSYD 727
            ...|.....||         :.....:.|.| ..|||:.:.:.:...::  |...||
  Fly   322 GDDESKLFCGPTHARNLYWNMTRVGDVNVQP-CPGGAAGIAKWRCVLMKRIPDSGYD 377

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG42402NP_001287642.1 Gal_Rha_Lectin 51..261 CDD:459238
Gal_Rha_Lectin_EVA1_EVA1C_rpt2 264..361 CDD:438686 24/111 (22%)
CirlNP_001260807.1 Gal_Rha_Lectin_dCirl 22..113 CDD:438687 23/93 (25%)
GAIN 451..682 CDD:465137
GPS 705..752 CDD:197639
7tmB2_CELSR_Adhesion_IV 763..1035 CDD:320557
TM helix 1 765..790 CDD:320557
TM helix 2 801..823 CDD:320557
TM helix 3 832..859 CDD:320557
TM helix 4 875..895 CDD:320557
TM helix 5 913..942 CDD:320557
TM helix 6 960..987 CDD:320557
TM helix 7 997..1022 CDD:320557
Herpes_TAF50 <1219..1365 CDD:308764
Blue background indicates that the domain is not in the aligned region.

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