DRSC/TRiP Functional Genomics Resources

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Protein Alignment OtopLc and Otop1

DIOPT Version :10

Sequence 1:NP_001303575.1 Gene:OtopLc / 7354434 FlyBaseID:FBgn0259150 Length:1596 Species:Drosophila melanogaster
Sequence 2:NP_766297.2 Gene:Otop1 / 21906 MGIID:2388363 Length:600 Species:Mus musculus


Alignment Length:741 Identity:142/741 - (19%)
Similarity:259/741 - (34%) Gaps:265/741 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly   823 GGPDSSDPPSSPGGS--SSQPALSGSQADGQLALMYHSHQLTNYPVLPAIKRTHRPSFVYPPMPR 885
            |||.:   ||||..|  ||:.|.||..|               .|:.|            ||:.|
Mouse     3 GGPGA---PSSPAASSGSSRAAPSGIAA---------------CPLSP------------PPLAR 37

  Fly   886 -----------VKAGDALATLFSALYGKLLVVMGIAFPMA-EVISTYIPPS----------FYEV 928
                       ......||...|:.||..:.|.|:.|.:| .|.:|.:..|          ..::
Mouse    38 GSPQASGPRRGASVPQKLAETLSSQYGLNVFVAGLLFLLAWAVHATGVGKSDLLCVLTALMLLQL 102

  Fly   929 YYLYLYIGSMIFLLFMYATLIWGRPKLPVPIASPSKSATKASGTDSMDESDTDSNSVHHRLPPPI 993
            .::..|:|..    :|...||  |||                                       
Mouse   103 LWMLWYVGRS----YMQRRLI--RPK--------------------------------------- 122

  Fly   994 PVRRPSLLSPLGRRDAHYGSFYLRMGAVAFGIGSMIYSGLEFGQYFELNPDTKCHNVLLALTPAT 1058
                          |.|.|:.:||.....|...:::...|:...:...   ::|.:....:.|.|
Mouse   123 --------------DTHAGARWLRGSITLFAFITVVLGCLKVAYFIGF---SECLSATEGVFPVT 170

  Fly  1059 RMAFIFIQMYFIFLNNEQIKVYRYKIIARFGLMHMIGTNLAVWLNVLIQETKHEILTFYNPENRT 1123
            ......:|:||::.:.:.| :..:|.:.|||::|.:.|||.:|.|.::.|:||::   ...:.|.
Mouse   171 HAVHTLLQVYFLWGHAKDI-IMSFKTLERFGVIHSVFTNLLLWANSVLNESKHQL---NEHKERL 231

  Fly  1124 LRISHRIPGHSRGHAII---QHDPTAHLRVPRGLKGPYQIFECRRTNIIGTLVQDASPFLFPCTI 1185
            :.:..       |:..|   .|.|..:...|                .:.:.:.....:|:|..|
Mouse   232 ITLGF-------GNITIVLDDHTPQCNCTPP----------------ALCSALSHGIYYLYPFNI 273

  Fly  1186 EYSLICAAILYVMWRSISRPQTPTPQRPDMISSPMKRSPHHYSVDCARAHKGLFV----GILILV 1246
            ||.::.:.:|||:|::|.|       |.|        |..|..:.|  ...|:.|    |:.:|.
Mouse   274 EYQILASTMLYVLWKNIGR-------RVD--------SSQHQKMQC--RFDGVLVGSVLGLTVLA 321

  Fly  1247 LTIISLIIFFVLISRPE---------FVAMAVTEVTICELLIYGTA-TIATLVGMIQIRHLQYDA 1301
            .||..::::.:.|.|.:         |...|:|     .||:.|.| .:.:.:..:..:.|....
Mouse   322 ATIAVVVVYMIHIGRSKSKSESALIMFYLYAIT-----VLLLMGAAGLVGSWIYRVDEKSLDESK 381

  Fly  1302 YRSFSLDDILLVGAQTGSFLYNIFTVIA-------GHFTLRSDDMLVPINALASIVQTACQTMFI 1359
            ..:..||..|||...:||:|.:..:::|       ..:|..:    :|.:.|. ||:...|.:||
Mouse   382 NPARKLDVDLLVATGSGSWLLSWGSILAIACAETRPPYTWYN----LPYSVLV-IVEKYVQNIFI 441

  Fly  1360 LDASRRQAVS-PEHLR----------------------------------------KKPGRE--- 1380
            :::...:... ||.:|                                        ::.|:|   
Mouse   442 IESVHLEPEGVPEDVRTLRVVTVCSSEAAALAASTLGSQGMAQDGSPAVNGNLCLQQRCGKEDQE 506

  Fly  1381 ---------------------------IVTFMLVVNLAMWAISTLEKSRAESHPIQLNFYGLWAW 1418
                                       |..|:.:.|:::|............:.::...:|...|
Mouse   507 SGWEGATGTTRCLDFLQGGMKRRLLRNITAFLFLCNISLWIPPAFGCRPEYDNGLEEIVFGFEPW 571

  Fly  1419 TIITHVSMPLAIFYRFHSTVCLCEIW 1444
            .|:.:::||.:||||.|:...|.|::
Mouse   572 IIVVNLAMPFSIFYRMHAAAALFEVY 597

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
OtopLcNP_001303575.1 Retinal <442..643 CDD:464722
Otopetrin 1015..1434 CDD:460840 96/513 (19%)
Otop1NP_766297.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..50 19/76 (25%)
Otopetrin 131..586 CDD:460840 95/511 (19%)
Blue background indicates that the domain is not in the aligned region.

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