DRSC/TRiP Functional Genomics Resources

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Protein Alignment DIP-epsilon and musk

DIOPT Version :10

Sequence 1:NP_001137799.1 Gene:DIP-epsilon / 7354433 FlyBaseID:FBgn0259714 Length:467 Species:Drosophila melanogaster
Sequence 2:NP_001004503.1 Gene:musk / 334526 ZFINID:ZDB-GENE-030131-6458 Length:941 Species:Danio rerio


Alignment Length:344 Identity:82/344 - (23%)
Similarity:129/344 - (37%) Gaps:77/344 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    43 TLNNVISEDPEFTDVIENITVPAGRNVKLACSVKNLGSYKVAWMHFEQSAILTVHNHVITRNPRI 107
            :|...:...|..|.::|.:......|....|.|.:.....:.|.............:||..|.::
Zfish    17 SLTEGLQRAPRITTLLETVDSSLDHNATFICEVDSYPQADIIWTRNNYPIRYYDSRYVIQENGQM 81

  Fly   108 SVTHDKHDKHRTWFLHINNVQEEDRGRYMCQINT-VTAKTQYGFVKVVVPPNIDDALTSSDIIVR 171
                          |.|.||::.|.|.|.|..|. |......|.:::.:.|.|....|:..:|:.
Zfish    82 --------------LIIPNVKDSDSGEYCCIANNGVGEAKSCGALQLKMKPQIKRHPTNMTLILE 132

  Fly   172 EGDNVTLRCKAKGSPEPTIKW-KRDD----GNKIVINKTLEVHDLETDSLELERISRLHMGAYLC 231
              ....|.|.:.|.|:|.|.| |.||    .|:|.|        ||:.||::..|.:...|.|.|
Zfish   133 --SKAVLPCLSLGYPKPEISWIKEDDLIKANNRIAI--------LESGSLKITNIKKEDAGQYRC 187

  Fly   232 IASNGVPPSVSKRIKVSVDFSPMVWIPHQLVGIP------IGFNITLECFIEANPTSLNYWTREN 290
            :|.|....:.|:.:.:.|.      .|.:::.:|      ||..:||||....||.....|. ||
Zfish   188 VARNSFGIAFSRPVTIEVQ------APAKILKVPKEKRVQIGSEVTLECNATGNPIPSITWL-EN 245

  Fly   291 DQMITESSKYKT---ETI-----------------------PGHPSYKATMRLTITNVQSSDYGN 329
            ...|:.:|..:|   |.|                       .|..:.|||.::|:     |::..
Zfish   246 GNTISGASVVETLVGEVILSVLQVVVHKPALYTCQATNRHSGGENTVKATAKITV-----SEWRL 305

  Fly   330 YKCVA---KNPRGDMDGNI 345
            ||..|   ...|||:..|:
Zfish   306 YKGHAGYCSTYRGDVCRNV 324

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
DIP-epsilonNP_001137799.1 IG_like 59..155 CDD:214653 19/96 (20%)
Ig strand B 69..73 CDD:409353 0/3 (0%)
Ig strand C 82..86 CDD:409353 0/3 (0%)
Ig strand E 117..124 CDD:409353 1/6 (17%)
Ig 157..249 CDD:472250 28/96 (29%)
Ig strand B 176..180 CDD:409289 1/3 (33%)
Ig strand C 189..193 CDD:409289 2/4 (50%)
Ig strand E 213..218 CDD:409289 2/4 (50%)
Ig strand F 228..233 CDD:409289 2/4 (50%)
Ig strand G 242..245 CDD:409289 1/2 (50%)
IG_like 267..348 CDD:214653 28/108 (26%)
Ig strand C 283..287 CDD:409394 0/3 (0%)
Ig strand E 313..319 CDD:409394 2/5 (40%)
Ig strand F 329..334 CDD:409394 2/4 (50%)
muskNP_001004503.1 Ig 32..113 CDD:472250 19/94 (20%)
Ig strand B 43..47 CDD:409353 0/3 (0%)
Ig strand C 56..60 CDD:409353 0/3 (0%)
Ig strand E 80..84 CDD:409353 1/17 (6%)
Ig strand F 94..99 CDD:409353 2/4 (50%)
Ig strand G 107..110 CDD:409353 0/2 (0%)
IgI_2_MuSK 119..206 CDD:409560 27/96 (28%)
Ig strand A 119..122 CDD:409560 1/2 (50%)
Ig strand A' 126..128 CDD:409560 0/1 (0%)
Ig strand B 134..142 CDD:409560 2/7 (29%)
Ig strand C 148..153 CDD:409560 2/4 (50%)
Ig strand C' 155..158 CDD:409560 2/2 (100%)
Ig strand D 163..167 CDD:409560 2/11 (18%)
Ig strand E 170..176 CDD:409560 2/5 (40%)
Ig strand F 183..191 CDD:409560 4/7 (57%)
Ig strand G 194..199 CDD:409560 0/4 (0%)
Ig strand G' 201..206 CDD:409560 0/4 (0%)
Ig 212..300 CDD:472250 21/88 (24%)
Ig strand B 226..230 CDD:409353 2/3 (67%)
Ig strand C 239..243 CDD:409353 0/3 (0%)
Ig strand E 260..264 CDD:409353 1/3 (33%)
Ig strand F 276..281 CDD:409353 0/4 (0%)
Ig strand G 293..296 CDD:409353 2/2 (100%)
CRD_TK_ROR_related 309..449 CDD:143578 5/16 (31%)
KR 454..536 CDD:214527
PTKc_Musk 640..930 CDD:133181
Blue background indicates that the domain is not in the aligned region.

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