DRSC/TRiP Functional Genomics Resources

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Protein Alignment: CG42306 and UBX4

Sequence 1:NP_001137700.1 Gene:CG42306 FlyBaseID:FBgn0259202 Length:121 Species:Drosophila melanogaster
Sequence 2:NP_013783.1 Gene:UBX4 SGDID:S000004671 Length:416 Species:Saccharomyces cerevisiae

Alignment Length:28 Identity:10/29 (34%)
Similarity:14/29 (48%) Gaps:4/29 (14%)


  Fly     1 MSFNFYV----ESFNSTLQSIARQVEQF 24
            :.:||.:    .|.||||..:..|..||
Yeast     6 VKYNFQLFKCKVSLNSTLNDVLHQSIQF 33

Known Domains:


GeneSequenceDomainRegion External IDIdentity
CG42306NP_001137700.1 None
UBX4NP_013783.1 TUG-UBL1 6..71 CDD:314402 10/29 (34%)
UBX 277..351 CDD:197552
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
eggNOG 1 0.900 E1_KOG2699
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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