DRSC/TRiP Functional Genomics Resources

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Protein Alignment: CG42306 and Aspscr1

Sequence 1:NP_001137700.1 Gene:CG42306 FlyBaseID:FBgn0259202 Length:121 Species:Drosophila melanogaster
Sequence 2:XP_002724631.2 Gene:Aspscr1 RGDID:1588666 Length:551 Species:Rattus norvegicus

Alignment Length:76 Identity:18/77 (23%)
Similarity:25/77 (32%) Gaps:29/77 (38%)


  Fly    34 DLRGNLESLTGD-FRWENGPI---AFTDLQ---------ATLLKVLIVLLLGTCVLAGYSWSIYG 85
            |:|..|..|..: .|.|..|:   ||.:.|         ...|:||..                .
  Rat   348 DVRRRLAQLKSERKRLEEAPLVTKAFREAQMKEKLERYPKVALRVLFP----------------D 396

  Fly    86 KVITEKFVRPS 96
            :.|.:.|.|||
  Rat   397 RYILQGFFRPS 407

Known Domains:


GeneSequenceDomainRegion External IDIdentity
CG42306NP_001137700.1 None
Aspscr1XP_002724631.2 TUG-UBL1 15..78 CDD:288347
UBQ 386..457 CDD:294102 8/39 (21%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
eggNOG 1 0.900 E1_KOG2699
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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