DRSC/TRiP Functional Genomics Resources

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Protein Alignment C1R and snk

DIOPT Version :9

Sequence 1:NP_001341275.1 Gene:C1R / 715 HGNCID:1246 Length:719 Species:Homo sapiens
Sequence 2:NP_001097766.1 Gene:snk / 41607 FlyBaseID:FBgn0003450 Length:435 Species:Drosophila melanogaster


Alignment Length:275 Identity:80/275 - (29%)
Similarity:116/275 - (42%) Gaps:70/275 - (25%)


- Green bases have known domain annotations that are detailed below.


Human   478 IIGGQKAKMGNFP------WQVFTNIHGRG----------GGALLGDRWILTAAHTLYPKEHEAQ 526
            |:||...:.|.||      |     ..|.|          ||||:.:.::|||||.       |.
  Fly   186 IVGGTPTRHGLFPHMAALGW-----TQGSGSKDQDIKWGCGGALVSELYVLTAAHC-------AT 238

Human   527 SNASLDVFLGHTNVEELMKLGNHPIRRVS------------VHPDYRQDESYNFEGDIALLELEN 579
            |.         :...::::||...:...|            :||.||....|:   |||||:|..
  Fly   239 SG---------SKPPDMVRLGARQLNETSATQQDIKILIIVLHPKYRSSAYYH---DIALLKLTR 291

Human   580 SVTLGPNLLPIC---LPDNDTFYDLGLMGYV-SGFGVME--EKIAHDLRFVRLPVANPQACENWL 638
            .|.....:.|.|   ||      :|.:...| :|:|..|  ...::.||.|.|.|.....|:...
  Fly   292 RVKFSEQVRPACLWQLP------ELQIPTVVAAGWGRTEFLGAKSNALRQVDLDVVPQMTCKQIY 350

Human   639 RGKNRMD-VFSQNMFCAGHPSLKQDACQGDSGGVFAVRDP--NTDRWVATGIVSWGIGCS--RGY 698
            |.:.|:. ...:..||||:....:|.|||||||......|  |...:| .||.|:|..|:  ...
  Fly   351 RKERRLPRGIIEGQFCAGYLPGGRDTCQGDSGGPIHALLPEYNCVAFV-VGITSFGKFCAAPNAP 414

Human   699 GFYTKVLNYVDWIKK 713
            |.||::.:|:|||:|
  Fly   415 GVYTRLYSYLDWIEK 429

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
C1RNP_001341275.1 CUB 41..152 CDD:214483
FXa_inhibition 175..203 CDD:317114
CUB 207..316 CDD:278839
Sushi 323..385 CDD:306569
Sushi 390..461 CDD:306569
Tryp_SPc 477..711 CDD:214473 77/271 (28%)
snkNP_001097766.1 CLIP 93..139 CDD:197829
Tryp_SPc 186..430 CDD:238113 80/275 (29%)
Tryp_SPc 186..427 CDD:214473 77/271 (28%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
10.910

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