DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment C1R and psh

DIOPT Version :9

Sequence 1:NP_001341275.1 Gene:C1R / 715 HGNCID:1246 Length:719 Species:Homo sapiens
Sequence 2:NP_573297.1 Gene:psh / 32832 FlyBaseID:FBgn0030926 Length:394 Species:Drosophila melanogaster


Alignment Length:284 Identity:87/284 - (30%)
Similarity:122/284 - (42%) Gaps:59/284 - (20%)


- Green bases have known domain annotations that are detailed below.


Human   465 CGKPVNPVEQRQ------RIIGGQKAKMGNFPWQ-----VFTNIHGRGGGALLGDRWILTAAHTL 518
            |.|.....:||.      .|:||.....|.:|..     :......|.||:|:..|::|||||.:
  Fly   125 CKKIRERKQQRSGNQLVIHIVGGYPVDPGVYPHMAAIGYITFGTDFRCGGSLIASRFVLTAAHCV 189

Human   519 YPKEHEAQSNASLDVFLGHTNVEELMKLGNHP-----IRRVSVHPDYRQDESYNFEGDIALLELE 578
                 ...:|....|.||..|:|.    .:|.     ||.|.:||.| ....||   |||:||||
  Fly   190 -----NTDANTPAFVRLGAVNIEN----PDHSYQDIVIRSVKIHPQY-VGNKYN---DIAILELE 241

Human   579 NSVTLGPNLLPICL-------PDNDTFYDLGLMGYVSGFGVM------EEKI--AHDLRFVRLPV 628
            ..|....|:.|.||       |.|..|       :|:|:||:      ..||  ...|..|.|..
  Fly   242 RDVVETDNIRPACLHTDATDPPSNSKF-------FVAGWGVLNVTTRARSKILLRAGLELVPLDQ 299

Human   629 ANPQACENWLRGKNRM--DVFSQNMFCAGHPSLKQDACQGDSGGVFAVRDPNTDRWVAT--GIVS 689
            .|....|.  .|..|:  .....::.||....|..|||:|||||.. :.:.|.:..:.|  |::|
  Fly   300 CNISYAEQ--PGSIRLLKQGVIDSLLCAIDQKLIADACKGDSGGPL-IHELNVEDGMYTIMGVIS 361

Human   690 WGIGCSR-GYGFYTKVLNYVDWIK 712
            .|.||:. ..|.||:|.:|:|:|:
  Fly   362 SGFGCATVTPGLYTRVSSYLDFIE 385

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
C1RNP_001341275.1 CUB 41..152 CDD:214483
FXa_inhibition 175..203 CDD:317114
CUB 207..316 CDD:278839
Sushi 323..385 CDD:306569
Sushi 390..461 CDD:306569
Tryp_SPc 477..711 CDD:214473 82/263 (31%)
pshNP_573297.1 CLIP 30..79 CDD:197829
Tryp_SPc 143..384 CDD:214473 82/263 (31%)
Tryp_SPc 144..387 CDD:238113 83/265 (31%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
10.910

Return to query results.
Submit another query.