DRSC/TRiP Functional Genomics Resources

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Protein Alignment Atp8b3 and CG33298

DIOPT Version :9

Sequence 1:NP_080370.2 Gene:Atp8b3 / 67331 MGIID:1914581 Length:1335 Species:Mus musculus
Sequence 2:NP_995666.1 Gene:CG33298 / 2768929 FlyBaseID:FBgn0032120 Length:1517 Species:Drosophila melanogaster


Alignment Length:1347 Identity:402/1347 - (29%)
Similarity:634/1347 - (47%) Gaps:293/1347 - (21%)


- Green bases have known domain annotations that are detailed below.


Mouse     9 NLEDKDTEFTWEVKANDRTYHKQFKKKGFLCWRQKKYKSNAIHTAKYNIFSFLPLNLYEQFHRMS 73
            |..||..|.::.....:.|...:..|:..   ...::..|.|.|.||.:.||:|.||.|||||::
  Fly   217 NTGDKFEERSYRTVVPNHTVPPKTPKRDH---PNGQFVGNKIRTTKYTLLSFIPKNLLEQFHRVA 278

Mouse    74 NLYFLFIIILQGIPEISTLPWFTLFAPLVCLFVIRATRDLVDDIGRHRSDKIINNRPCQILRGKS 138
            ||||:||::|..:||||.........|::.:..:.|.:||.:|..|..|||.|||..|::..|::
  Fly   279 NLYFIFIVLLNWVPEISAFGKEVAMIPVLFVLGVTAVKDLFEDRRRRASDKRINNTTCRVYDGET 343

Mouse   139 FLWK--KWKNLCVGDVVCLSKDSIVPADLLLLASTEPSSLCYVETADIDGETNLKFRQALTVTHH 201
            ..:|  ||:.|.|||:|.||.:..||||:|||.:::|..:||::|.|:|||||||.|:.:. ...
  Fly   344 ERYKKVKWQELRVGDIVHLSNNETVPADILLLRTSDPQGVCYIDTCDLDGETNLKRREVVR-GFE 407

Mouse   202 ELTSPKKMASFQGTVTCEEPNSRMHHFVGSL-EWNSRKYPLDIGNLLLRGCKIRNTDTCYGLVIY 265
            |:.|....:.|...|..:.|.::::.|.|:| .....:.|:....||||..:::|||...|:|:|
  Fly   408 EMQSIFVPSKFVSRVEADAPTTKLYRFHGALIHPTGERVPISTECLLLRESRLKNTDYIEGIVVY 472

Mouse   266 AGLDTKIMKNCGKIHLKRTKLDLMMNKLVALIFLSLVIASLLLTVGFTFMVKQFKAKHY---YMS 327
            ||.:||.|.|......||::::..||..|....:.|:|..::..:|....:..|  .|:   |:.
  Fly   473 AGHETKSMLNNSGPRYKRSQVEQQMNIDVIWCVIILLILCVVGAIGCRMWLSSF--THFPVPYLP 535

Mouse   328 PTHGRSDAMESFFIFWGFLILLSVMVPMAMFIIAEFIYLGNSIFINWDLNMYYEPLDMPAKARST 392
            |....:: |||.:|||.::::|.||:|:::::..|...:.....|:.:::::....:...:.|:.
  Fly   536 PNKLTAN-MESMWIFWTYIVILQVMIPLSLYVTIELCKILQVFHIHNNVDLFDAETNKQTECRAM 599

Mouse   393 SLNDQLGQVQYIFSDKTGTLTQNIMTFKKCCINGCIYDSDDEHGTLRKRNPYAWNPFADGKLQFY 457
            ::.::|||:|:||:|||||||:|.|.|::|.:||    ||..|........|: .|.|.......
  Fly   600 NITEELGQIQHIFTDKTGTLTENKMIFRRCVVNG----SDYNHPPSELEKIYS-KPGAPAPPLIP 659

Mouse   458 NKELES----LVQGR----QDRAVQEFWRLLAICHTVMV-------------------------- 488
            |..|.|    |.||.    ..:.:|||..:||||:||:|                          
  Fly   660 NDNLNSDMAQLTQGTYLTPHAQRIQEFLVVLAICNTVIVGAAPHRDMMNASGIIEVQQIGNSPAN 724

Mouse   489 ----------------------------------------------------------------- 488
                                                                             
  Fly   725 LKHGKQRQKLLASSTSTTTTTTIINGPTTQPQVVSIPADRYIRLAESRSVTPSPPPNLLFALPAQ 789

Mouse   489 ----------------------------------------------------------------- 488
                                                                             
  Fly   790 SHQPTLSPISSSAESSPNSESESPSPPMKNKSLSNSISPTGRAKAVINSKITSIATFLNAKTQGK 854

Mouse   489 -------------QEKDNQLLYQAASPDEEALVTAARNFGYVFLSRTQDTITLVEL---GEERVY 537
                         :..|.:.||:|.||||.|||.||.::....|:|:.:.| ||.:   |..|.|
  Fly   855 RMKLPSSKTGTIYRTADGRPLYEAESPDELALVNAAYSYDCCLLNRSPNQI-LVSMPMAGATREY 918

Mouse   538 QVLAMMDFNSVRKRMSVLVRNPEGS--ICLYTKGADTVILERL------RSKGVMEATTEEVLAA 594
            ::|.::.|:|.||.||::||. .||  |.|||||||:.|:..|      ..:|::...|:::|..
  Fly   919 EILKVLPFDSSRKCMSIVVRQ-IGSQEIVLYTKGADSSIMPVLVPCSHNSPEGILREQTQQLLDR 982

Mouse   595 FAEQTLRTLCLAYKDVEEDAYKEWEPEHQEAALLLQNRAQALHQVYNKMEQNLQLLGATAIEDKL 659
            :|.:.||.|.:|.:.:....|.:|...|||..:.|:||.:.|...:.|:|.||.|||||.|||:|
  Fly   983 YAREGLRILVMAKRTLNSADYTDWWARHQEIEMSLENRERRLRDSFAKLESNLTLLGATGIEDRL 1047

Mouse   660 QDGVPETIKCLKKGNIKIWVLTGDKPETAVNIGFACQLLSENMIIL----EDKDINQ-VLERYWE 719
            ||||||||..|....|.:|||||||||||:||.::.:|.::.|.::    ..:|..: .:..|..
  Fly  1048 QDGVPETIASLLSAGISVWVLTGDKPETAINIAYSAKLFTQQMELIRLTARSRDAAETAINFYLT 1112

Mouse   720 DNVHQKAFKMMTHHNMALVINGEFLDQLLLSLRKEPRALVQNAVVDEVAQEPVVSALDFLQKRRI 784
            |..:.|....:.:        |:       ||||:.||||.:.           ..|.|:.    
  Fly  1113 DMENDKTTSTLGY--------GQ-------SLRKKQRALVVDG-----------KTLTFIL---- 1147

Mouse   785 SQMWRNAGPSLGTSHSADSKIRESPEVQRERAFVDLASKCQAVICCRVTPKQKALVVALVKKYQQ 849
                                   .|:.:....|:.|:.:|.:|:|||.||.|||.:|.:||:...
  Fly  1148 -----------------------DPKSKLILPFLRLSKRCASVLCCRSTPLQKAYLVKVVKEELN 1189

Mouse   850 VVTLAIGDGANDVNMIKTADIGVGLAGQEGMQAVQNSDYVLAQFCYLQRLLLVHGRWSYMRVCKF 914
            :.|||||||||||:||:.||:|||::||||||||..:|:.|.:|.||:||||.||.|.|.|:.:.
  Fly  1190 LRTLAIGDGANDVSMIQMADVGVGISGQEGMQAVMAADFTLPRFRYLERLLLAHGYWCYDRLSRM 1254

Mouse   915 LRYFFYKTVASMMAQIWFSLVNGFSAQPLYEGWFLALFNLLYSTLPVLYIGLFEQDVTAEKSLKM 979
            :.|||||..|.:....|:.|..|||.|.:.:..:|.|:||::::||.|.||::::.|..:..||.
  Fly  1255 ILYFFYKNAAFVFLIFWYQLYCGFSGQVMMDQMYLMLYNLIFTSLPPLAIGVYDKRVAEDLLLKN 1319

Mouse   980 PELYMAGQKGELFNYSIFMQAITHGTITSMINFFVTVMVSSDMSKAGSSHDYQSLGVLVAISSLL 1044
            |.||..|:.|..:....|...:......|::.|||.:     .:.|.|.......|..:..|.|.
  Fly  1320 PYLYKNGRLGVAYRPHDFWLILLDALYQSLVIFFVAL-----CAYAESDVGIWEFGTTITASCLF 1379

Mouse  1045 SVTLEVMLVVKYWTLLFVGAVVLSLSSYVLMTSLTQSLWMYRISPKTFPFLFADYNVLF----EP 1105
            :..:...:.::.||:|.|.::||||.|:.|...:..|:.|.....:      :.|.|:|    ..
  Fly  1380 ANLVHCAIEIRSWTVLHVLSIVLSLGSFYLFAIVYDSVCMNCFGVR------SSYWVIFVCFASA 1438

Mouse  1106 CSLLLIVLNVALNVLPMLALRTIH---------RTVL---KQRPKGE 1140
            ...|:|:|:..:.|||.|.|.|:.         :.:|   ::|.:||
  Fly  1439 VHWLVIMLSTVVAVLPRLLLTTVRISLCPDDSTKVILQSKRERSRGE 1485

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Atp8b3NP_080370.2 P-type_ATPase_APLT_Dnf-like 47..1015 CDD:319770 362/1166 (31%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1192..1215
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1236..1280
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1314..1335
CG33298NP_995666.1 P-type_ATPase_APLT_Dnf-like 252..1355 CDD:319770 362/1166 (31%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Software error:

Can't use an undefined value as an ARRAY reference at /www/www.flyrnai.org/docroot/cgi-bin/DRSC_prot_align.pl line 1034.

For help, please send mail to the webmaster (ritg@hms.harvard.edu), giving this error message and the time and date of the error.

Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - -
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - -
Hieranoid 00.000 Not matched by this tool.