DRSC/TRiP Functional Genomics Resources

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Protein Alignment SOD1 and Sod1

DIOPT Version :10

Sequence 1:NP_000445.1 Gene:SOD1 / 6647 HGNCID:11179 Length:154 Species:Homo sapiens
Sequence 2:NP_476735.1 Gene:Sod1 / 39251 FlyBaseID:FBgn0003462 Length:153 Species:Drosophila melanogaster


Alignment Length:154 Identity:94/154 - (61%)
Similarity:113/154 - (73%) Gaps:2/154 - (1%)


- Green bases have known domain annotations that are detailed below.


Human     1 MATKAVCVLKGDGPVQGIINFEQKESNGPVKVWGSIKGLTEGLHGFHVHEFGDNTAGCTSAGPHF 65
            |..|||||:.||  .:|.:.|||:.|..||||.|.:.||.:||||||||||||||.||.|:||||
  Fly     1 MVVKAVCVINGD--AKGTVFFEQESSGTPVKVSGEVCGLAKGLHGFHVHEFGDNTNGCMSSGPHF 63

Human    66 NPLSRKHGGPKDEERHVGDLGNVTADKDGVADVSIEDSVISLSGDHCIIGRTLVVHEKADDLGKG 130
            ||..::||.|.||.||:|||||:.|..|....|:|.||.|:|.|...|||||:|||..|||||:|
  Fly    64 NPYGKEHGAPVDENRHLGDLGNIEATGDCPTKVNITDSKITLFGADSIIGRTVVVHADADDLGQG 128

Human   131 GNEESTKTGNAGSRLACGVIGIAQ 154
            |:|.|..|||||:|:.|||||||:
  Fly   129 GHELSKSTGNAGARIGCGVIGIAK 152

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SOD1NP_000445.1 Cu-Zn_Superoxide_Dismutase 3..147 CDD:238186 86/143 (60%)
Sod1NP_476735.1 Cu-Zn_Superoxide_Dismutase 2..150 CDD:469976 90/149 (60%)

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