DRSC/TRiP Functional Genomics Resources

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Protein Alignment SNAI1 and wor

DIOPT Version :10

Sequence 1:NP_005976.2 Gene:SNAI1 / 6615 HGNCID:11128 Length:264 Species:Homo sapiens
Sequence 2:NP_476601.1 Gene:wor / 34906 FlyBaseID:FBgn0001983 Length:548 Species:Drosophila melanogaster


Alignment Length:144 Identity:94/144 - (65%)
Similarity:111/144 - (77%) Gaps:6/144 - (4%)


- Green bases have known domain annotations that are detailed below.


Human   124 EAYAAFPGLGQVPKQLAQLSEAKDLQARKAFNCKYCNKEYLSLGALKMHIRSHTLPCVCGTCGKA 188
            ::|:.:.||.:  .|......|:..|.:|.|:||.|:|.|:||||||||||:|||||.|..||||
  Fly   352 KSYSTYSGLSK--HQQFHCPSAEGNQVKKVFSCKNCDKTYVSLGALKMHIRTHTLPCKCPICGKA 414

Human   189 FSRPWLLQGHVRTHTGEKPFSCPHCSRAFADRSNLRAHLQTHSDVKKYQCQACARTFSRMSLLHK 253
            ||||||||||:|||||||||||.||:||||||||||||:|||||||||.|..|.::|||||||.|
  Fly   415 FSRPWLLQGHIRTHTGEKPFSCQHCNRAFADRSNLRAHMQTHSDVKKYSCPTCTKSFSRMSLLAK 479

Human   254 HQESGC----SGCP 263
            |.:|||    ||.|
  Fly   480 HLQSGCQTEQSGGP 493

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SNAI1NP_005976.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..27
SNAG domain. /evidence=ECO:0000305|PubMed:20389281, ECO:0000305|PubMed:21300290 1..20
Required and sufficient for interaction with KDM1A. /evidence=ECO:0000269|PubMed:20389281, ECO:0000269|PubMed:23721412 2..7
LATS2 binding 10..40
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 86..115
Destruction motif 95..100
Required for FBXL14-triggered degradation 120..151 6/26 (23%)
Required for nuclear localization and interaction with KPNB1, NOTCH1 and PARP1. /evidence=ECO:0000269|PubMed:21577210, ECO:0000269|PubMed:22128911 151..264 88/117 (75%)
C2H2 Zn finger 156..176 CDD:275368 15/19 (79%)
C2H2 Zn finger 182..202 CDD:275368 16/19 (84%)
zf-H2C2_2 195..218 CDD:463886 19/22 (86%)
zf-C2H2 208..230 CDD:395048 18/21 (86%)
C2H2 Zn finger 210..230 CDD:275368 16/19 (84%)
C2H2 Zn finger 238..255 CDD:275368 10/16 (63%)
worNP_476601.1 C2H2 Zn finger 270..290 CDD:275368
C2H2 Zn finger 317..334 CDD:275368
zf-C2H2 345..367 CDD:395048 4/16 (25%)
C2H2 Zn finger 347..367 CDD:275368 4/16 (25%)
zf-C2H2 380..402 CDD:395048 16/21 (76%)
C2H2 Zn finger 382..402 CDD:275368 15/19 (79%)
zf-C2H2 406..428 CDD:395048 17/21 (81%)
C2H2 Zn finger 408..428 CDD:275368 16/19 (84%)
zf-C2H2 434..456 CDD:395048 18/21 (86%)
C2H2 Zn finger 436..456 CDD:275368 16/19 (84%)
C2H2 Zn finger 464..481 CDD:275368 10/16 (63%)
Blue background indicates that the domain is not in the aligned region.

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