DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment ATL2 and Atl2

DIOPT Version :9

Sequence 1:NP_001317392.1 Gene:ATL2 / 64225 HGNCID:24047 Length:584 Species:Homo sapiens
Sequence 2:NP_001094141.1 Gene:Atl2 / 298757 RGDID:1305125 Length:583 Species:Rattus norvegicus


Alignment Length:582 Identity:531/582 - (91%)
Similarity:549/582 - (94%) Gaps:1/582 - (0%)


- Green bases have known domain annotations that are detailed below.


Human     1 MAEGDEAARGQQPHQGLWRRRRTSDPSAAVNHVSSTTSLGENYEDDDLVNSDEVMKKPCPVQIVL 65
            |||||||||.|||.|||.|||:|||.|..||||||||||||:|||.|||||||||:|||||||||
  Rat     1 MAEGDEAARRQQPQQGLRRRRQTSDSSVGVNHVSSTTSLGEDYEDADLVNSDEVMRKPCPVQIVL 65

Human    66 AHEDDHNFELDEEALEQILLQEHIRDLNIVVVSVAGAFRKGKSFLLDFMLRYMYNKDSQSWIGGN 130
            ||||||||||||||||:|||||||||||||||||||||||||||||||||||||||||||||||:
  Rat    66 AHEDDHNFELDEEALERILLQEHIRDLNIVVVSVAGAFRKGKSFLLDFMLRYMYNKDSQSWIGGS 130

Human   131 NEPLTGFTWRGGCERETTGIQVWNEVFVIDRPNGTKVAVLLMDTQGAFDSQSTIKDCATVFALST 195
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
  Rat   131 NEPLTGFTWRGGCERETTGIQVWNEVFVIDRPNGTKVAVLLMDTQGAFDSQSTIKDCATVFALST 195

Human   196 MTSSVQVYNLSQNIQEDDLQHLQLFTEYGRLAMEEIYQKPFQTLMFLIRDWSYPYEHSYGLEGGK 260
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
  Rat   196 MTSSVQVYNLSQNIQEDDLQHLQLFTEYGRLAMEEIYQKPFQTLMFLIRDWSYPYEHSYGLEGGK 260

Human   261 QFLEKRLQVKQNQHEELQNVRKHIHNCFSNLGCFLLPHPGLKVATNPSFDGRLKDIDEDFKRELR 325
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
  Rat   261 QFLEKRLQVKQNQHEELQNVRKHIHNCFSNLGCFLLPHPGLKVATNPSFDGRLKDIDEDFKRELR 325

Human   326 NLVPLLLAPENLVEKEISGSKVTCRDLVEYFKAYIKIYQGEELPHPKSMLQATAEANNLAAVAGA 390
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
  Rat   326 NLVPLLLAPENLVEKEISGSKVTCRDLVEYFKAYIKIYQGEELPHPKSMLQATAEANNLAAVAGA 390

Human   391 RDTYCKSMEQVCGGDKPYIAPSDLERKHLDLKEVAIKQFRSVKKMGGDEFCRRYQDQLEAEIEET 455
            ||.||:|||||||||||||||||||||||||||||:|||||||||||||||||||||||||||||
  Rat   391 RDAYCRSMEQVCGGDKPYIAPSDLERKHLDLKEVALKQFRSVKKMGGDEFCRRYQDQLEAEIEET 455

Human   456 YANFIKHNDGKNIFYAARTPATLFAVMFAMYIISGLTGFIGLNSIAVLCNLVMGLALIFLCTWAY 520
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||..||||||
  Rat   456 YANFIKHNDGKNIFYAARTPATLFAVMFAMYIISGLTGFIGLNSIAVLCNLVMGLALTSLCTWAY 520

Human   521 VKYSGEFREIGTVIDQIAETLWEQRSPRKVFSKLFEVTRRRMVHRALSSAQRQRLSSNNNKK 582
            ||||||||||||:|||:||||||| ..:.:...|.|...|:.|..::.:....::|.:...|
  Rat   521 VKYSGEFREIGTMIDQVAETLWEQ-VLKPLGDNLMEENIRQSVTNSIKAGLTDQVSHHARLK 581

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ATL2NP_001317392.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..44 34/42 (81%)
GBP 70..341 CDD:280433 268/270 (99%)
Atl2NP_001094141.1 GBP 70..341 CDD:280433 268/270 (99%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C83684161
Domainoid 1 1.000 554 1.000 Domainoid score I5772
eggNOG 1 0.900 - - E1_KOG2037
HGNC 1 1.500 - -
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H56949
Inparanoid 1 1.050 1141 1.000 Inparanoid score I4438
NCBI 1 1.000 - -
OMA 1 1.010 - - QHG58971
OrthoDB 1 1.010 - - D1027269at2759
OrthoFinder 1 1.000 - - FOG0001595
OrthoInspector 1 1.000 - - oto136199
orthoMCL 1 0.900 - - OOG6_102856
Panther 1 1.100 - - LDO PTHR10751
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X1147
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
1818.270

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