Sequence 1: | NP_001035232.1 | Gene: | SCN2A / 6326 | HGNCID: | 10588 | Length: | 2005 | Species: | Homo sapiens |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_011733.3 | Gene: | CCH1 / 853131 | SGDID: | S000003449 | Length: | 2039 | Species: | Saccharomyces cerevisiae |
Alignment Length: | 2331 | Identity: | 423/2332 (18%) |
---|---|---|---|
Similarity: | 771/2332 (33%) | Gaps: | 804/2332 (34%) |
Human 4 SVLVPPGPDSFRFFTRESLAAIEQ-------RIAEEKAKRP----KQERKDEDDEN--------- 48
Human 49 -----------GPKP--NSDLEAG----------KSLPFIYGDIPPEMVSVPLEDLDPYYINKKT 90
Human 91 FIVLNKGKAISRFSATP------ALYILTPFNPIRKLAIKILVHSLFNML---------IMCTIL 140
Human 141 T----NCVFM-TMSNPPDWTKNVEYTFTGIYTFESLIKILARGFC-------------------- 180
Human 181 ----------------LEDF-----------------------------------------TFLR 188
Human 189 DPWNWLDFTVITFAYVTEFVDLGNV---SALRTFR---VLRALKTISVIPGLKTIVGALIQSVKK 247
Human 248 LSDVMILTVFCLSVFALIGLQLFMGNLRNKCLQW-----PPDNSSFEINITSFFNNSLDGNGTTF 307
Human 308 NRTVSIFNWDEYIEDKSHFYFLEGQNDALLCGNSSDAGQCPEGYICVKAGRNPNYGYTSFDTFSW 372
Human 373 AFLSLFRLMTQDFWENLYQLTLRAAGKTYMIFFVLVIFLGSFYLINLILAVVAMAYEEQNQATLE 437
Human 438 EAEQKEAEFQQMLEQLKKQQEEAQAAAAAASAESRDFSGAGGIGVFSESSSVASKLSSKSEKELK 502
Human 503 NRRKKKKQKEQSGEEEKNDRVRKSESEDSIRRKGFRFSLEGSRLT-YEKRFSSPHQSLLSIRGSL 566
Human 567 FSPRRNSRASLFSFRGRAKDIGSENDFADDEHSTFEDNDSRRDSLFVPHRHGERRHSNVSQASRA 631
Human 632 SRVLPILPMNGKMHSAVDCNGVVSLVGGPSTLTSAGQLLPEGTTTETEIRKRRSSSYHVSMDLLE 696
Human 697 DPTSRQRAMSIASILTNTMEELEESRQKCPPCWYKFANMCLIWDCCKPWLKVKHLVNLVVMDPFV 761
Human 762 DLAITICIVLNTLFMAMEHYPMTEQFSSVLSVGNLVFTGIFTAEMFLKIIAMDPYYYFQEGWNIF 826
Human 827 DGFIVSLSLMELGLANVEG--------LSVL---RSFRLLRVFKLAKS-WPTLNMLIKIIGNSVG 879
Human 880 ALGNLTLVLAIIVFIFAVVGMQLFGKSYKECVCKISNDCELPRWHMHDFFHSFLIVFRVLCGE-W 943
Human 944 IETMWDCME----VAGQTMCLTVFMMVMVIGNLVVLNLFLALLLSSFSSDNLAATDDDNEMNNLQ 1004
Human 1005 IAVGRMQKGIDFV-KRKIREFIQKAFV-RKQKALDEIKPLEDLNNKKDSCISNHTTIEIGKDLNY 1067
Human 1068 LKDGNGTTSGIGSSVEKYVVDESDYMSFINNPS----------LTVTVPIAVGESDFENLNTEEF 1122
Human 1123 SSESDMEESKEKLNATSSSEGSTVDIGAPAEGEQPEVEPEE---------------SLEPEACFT 1172
Human 1173 EDCVRKFKCCQISIEEGKGKL------------WWNLRKTCYKIVEHNWFETFIVFMILLSSGAL 1225
Human 1226 AFEDIYI------EQRKTIKTMLEYADKVFTYIFILEMLLKWVAYGF----QVYFTNAWCWLDFL 1280
Human 1281 IVDVSLVSLTANALGY----SELGAIKSLRTLRALRPLRALSRFEGMRVVVN-ALLGAIPSIMNV 1340
Human 1341 LLVCLIFWLIFSIMGVNLFAGKFYHCINYTTGEMFDVSVVNNYSECKALIESNQTARW------- 1398
Human 1399 -KNVKVNFDNVGLGYLSLLQVATFKGWMDIMYAAVDSRNVELQPKYEDNLYMYLYFVIFIIFGSF 1462
Human 1463 FTLNLFIGVIIDNFNQQKKKFGGQDIFMTEEQKKYYNAMKKLGSKKPQKPIPRPANKFQGMVFDF 1527
Human 1528 ---VTKQVFDIS--IMILICLNMVTMMVETDDQSQEMTNILYWINLVFIVLFTGECVLKLISLRY 1587
Human 1588 ------YYFTIGWNIFDFVVVILSIV-------------------GMFLAELIEKYFVSP---TL 1624
Human 1625 FRVIRLARIGRILRLIKGAKGIRTLLFALMMSLPALFNIGLLLFLVMFIYAIFGMSNFAYVKREV 1689
Human 1690 GIDDMFNFETFGNSMICLFQITTSAGWDGLLAPILNSGPPDCDPDKDHPGSSVKGDCGNPSVGIF 1754
Human 1755 FFVSYIIISFLVVVNMYIAVILENFSVATEE--SAEPLSEDDFEMFYEVWEKFDPDATQFIEFAK 1817
Human 1818 LSDFADALDPPL------------------LIAKPN-----KVQLIAMDLPMVSGDRIHCLDILF 1859
Human 1860 AFTKRVLGESGEMDALRIQMEERFMASNPSKVSYE------------PITTTLKRKQ-----EEV 1907
Human 1908 SAIIIQRAYRRYLLKQKVKKVSSI----------YKKDKGKECDGTPIKEDTL---IDKLNENST 1959
Human 1960 PEK--TDMTPSTTSPPSY-------------DSVTKPEKEKFEKDKSEKEDKGKDI 2000 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
SCN2A | NP_001035232.1 | I. {ECO:0000305} | 111..456 | 85/447 (19%) | |
Ion_trans | 150..435 | CDD:278921 | 70/373 (19%) | ||
Na_trans_cytopl | 514..630 | CDD:288761 | 9/117 (8%) | ||
II. {ECO:0000305} | 741..1013 | 55/289 (19%) | |||
Ion_trans | 776..971 | CDD:278921 | 42/212 (20%) | ||
Na_trans_assoc | 997..1203 | CDD:284034 | 42/245 (17%) | ||
III. {ECO:0000305} | 1190..1504 | 77/349 (22%) | |||
Ion_trans | 1225..1482 | CDD:278921 | 64/280 (23%) | ||
Na_channel_gate | 1474..1526 | CDD:240441 | 14/52 (27%) | ||
IV. {ECO:0000305} | 1513..1811 | 74/333 (22%) | |||
Ion_trans | 1548..1786 | CDD:278921 | 59/268 (22%) | ||
GPHH | 1798..1853 | CDD:293510 | 17/78 (22%) | ||
CCH1 | NP_011733.3 | Ion_trans | 486..722 | CDD:278921 | 58/273 (21%) |
Ion_trans | 795..1010 | CDD:278921 | 57/301 (19%) | ||
Ion_trans | 1228..1480 | CDD:278921 | 62/272 (23%) | ||
Ion_trans | 1566..1776 | CDD:278921 | 56/239 (23%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | E1_KOG2301 | |||
Hieranoid | 1 | 1.000 | ||||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 1 | 1.050 | 319 | 1.000 | Inparanoid score | I511 |
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | 0.952 | Consistency score | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
4 | 3.860 |