Sequence 1: | NP_001035232.1 | Gene: | SCN2A / 6326 | HGNCID: | 10588 | Length: | 2005 | Species: | Homo sapiens |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001024497.1 | Gene: | cca-1 / 181045 | WormBaseID: | WBGene00000367 | Length: | 1885 | Species: | Caenorhabditis elegans |
Alignment Length: | 1950 | Identity: | 490/1950 (25%) |
---|---|---|---|
Similarity: | 832/1950 (43%) | Gaps: | 486/1950 (25%) |
Human 105 ATPALYILTPFNPIRKLAIKILVHSLFNMLIMCTILTNCVFMTMSNP----PDW----------T 155
Human 156 KNVEYTFTGIYTFESLIKILARGFCLEDFTFLRDPWNWLDFTVITFAYVTEFV---DLG---NVS 214
Human 215 ALRTFRVLRALKTISVIPGLKTIVGALIQSVKKLSDVMILTVFCLSVFALIGLQLFMGNLRNKCL 279
Human 280 QWPPDNSSFEINITSFFNNSLDGNGTTFNRTVSIFNWDEYIEDKSHFYFLEGQNDA---LLCGN- 340
Human 341 ---SSDAGQCP---EGY----------------ICVKAGRNPNYGYTSFDTFSWAFLSLFRLMTQ 383
Human 384 DFWENLYQLTLRAAGKTYMIFFVLVIFLGSFYLINLILAVVAMAYEEQNQATLEEAEQKEAEFQQ 448
Human 449 MLEQLKKQQEE------AQAAAAAASAESRDFSGAGGI----GVFSESSSVASK-----LSSKSE 498
Human 499 KELKNRRKKKKQK-----------EQSGEEEKNDRVRKSESEDSIRRKGFRFSLEGSRLTYEKRF 552
Human 553 SSPHQSLLSI-RGSLFSPRRNSRASLFSFRGRAKDIGSENDFADDEHSTFEDNDSRRDSLFVPHR 616
Human 617 HGERRHSNVSQASRASRVLPILPMNGKMHSAVDCNGVVSLVGGPSTLTSAGQLLPEGTTTETEIR 681
Human 682 KRRSSSYHVSMDLLEDPTSRQRAMSIASILTNTMEELEESRQKCPPCWYKFANMCLIWDCCKPWL 746
Human 747 KVKHLVNLVVMDPFVDLAITICIVLNTLFMAMEHYPMTEQFSSVLSVGNLVFTGIFTAEMFLKII 811
Human 812 AMDPYYYFQEGWNIFDGFIVSLSLMELGLANVEGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGN 876
Human 877 SVGALGNLTL---VLAIIVFIFAVVGMQLFGKSY------------KECV--------------- 911
Human 912 -------CK----------------ISNDCELPRWHMHDFFHSFLIVFRVLCGE-WIETMWDCME 952
Human 953 VAGQTMCLTVFMMVMVIGNLVVLNLFLALLLSSFSSD-------------NLAATDDDNEMNNLQ 1004
Human 1005 IAVGR-----MQKGI---------------------------DFVKRK----IREFIQKAFVRKQ 1033
Human 1034 KALDEIKPLEDLNNKKDSCISNHTT--IEIGKDLNYLKDGNGTTSGIGSSVEKYVVDESDYMSFI 1096
Human 1097 NNPSLTVTVPIAVGESDFENLNTEEFSSESDMEESKEKLNATSSSEGSTVDIGAPAEGEQPEVEP 1161
Human 1162 EESLEPEACFTEDCVRKFKCCQISIEEGKGKLWWNLRKTCYKIVEHNWFETFIVFMILLSSGALA 1226
Human 1227 FEDIYIEQRKTIKTMLEYADKVFTYIFILEMLLKWVAYGFQV----YFTNAWCWLDFLIVDVSLV 1287
Human 1288 SLTANALGYSE----LGAIKSLRTLRALRPLRALSRFEGMRVVVNALLGAIPSIMNVLLVCLIFW 1348
Human 1349 LIFSIMGVNLFAGKFYHCINYTTGEMFDVSVVNNYSECKALIESNQTARWKNVKVNFDNVGLGYL 1413
Human 1414 SLLQVATFKGWMDIMYAAVDSRNVELQPKYEDNLYMYLYFVIFIIFGSFFTLNLFIGVIIDNFNQ 1478
Human 1479 QKKKFGGQDIFMTEEQKKYYNAMKKLGSK-KPQKPIPRPANKFQGM----------------VFD 1526
Human 1527 FVTKQVFDISIMILICLNMVTMMVETDDQSQEMTNILYWINLVFIVLFTGECVLKLISLRYYYFT 1591
Human 1592 I-GWNIFDFVVVILSIVGMFLAEL-IEKYFVSPTLFRVIRLARIGRILRLIKGAKGIRTLLFALM 1654
Human 1655 MSLPALFNIGLLLFLVMFIYAIFGMSNFAYVKREV-------GIDDMFNFETFGNSMICLFQITT 1712
Human 1713 SAGWDGLLAPILNSGPPDCDPDKDHPGSSVKGDCGNPSVGIFFFVSYIIISFLVVVNMYIAVILE 1777
Human 1778 NFSVA----TEESAEPL----------SEDDFEMFYEVWEKFDPDATQFIEFAKLSDFADALDPP 1828 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
SCN2A | NP_001035232.1 | I. {ECO:0000305} | 111..456 | 109/391 (28%) | |
Ion_trans | 150..435 | CDD:278921 | 91/331 (27%) | ||
Na_trans_cytopl | 514..630 | CDD:288761 | 19/117 (16%) | ||
II. {ECO:0000305} | 741..1013 | 94/344 (27%) | |||
Ion_trans | 776..971 | CDD:278921 | 74/249 (30%) | ||
Na_trans_assoc | 997..1203 | CDD:284034 | 33/244 (14%) | ||
III. {ECO:0000305} | 1190..1504 | 106/322 (33%) | |||
Ion_trans | 1225..1482 | CDD:278921 | 94/265 (35%) | ||
Na_channel_gate | 1474..1526 | CDD:240441 | 15/69 (22%) | ||
IV. {ECO:0000305} | 1513..1811 | 105/337 (31%) | |||
Ion_trans | 1548..1786 | CDD:278921 | 85/251 (34%) | ||
GPHH | 1798..1853 | CDD:293510 | 6/31 (19%) | ||
cca-1 | NP_001024497.1 | Ion_trans | 157..461 | CDD:278921 | 93/335 (28%) |
Ion_trans | 670..938 | CDD:278921 | 81/272 (30%) | ||
Ion_trans | 1176..1430 | CDD:278921 | 94/264 (36%) | ||
Ion_trans | 1506..1721 | CDD:278921 | 78/224 (35%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | E1_KOG2301 | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 0 | 0.000 | Not matched by this tool. | |||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
1 | 0.900 |