Sequence 1: | NP_001035232.1 | Gene: | SCN2A / 6326 | HGNCID: | 10588 | Length: | 2005 | Species: | Homo sapiens |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_012826731.1 | Gene: | scn1a / 100488621 | XenbaseID: | XB-GENE-978019 | Length: | 2020 | Species: | Xenopus tropicalis |
Alignment Length: | 2024 | Identity: | 1703/2025 (84%) |
---|---|---|---|
Similarity: | 1849/2025 (91%) | Gaps: | 23/2025 (1%) |
Human 1 MAQSVLVPPGPDSFRFFTRESLAAIEQRIAEEKAKRPKQERKDEDDENGPKPNSDLEAGKSLPFI 65
Human 66 YGDIPPEMVSVPLEDLDPYYINKKTFIVLNKGKAISRFSATPALYILTPFNPIRKLAIKILVHSL 130
Human 131 FNMLIMCTILTNCVFMTMSNPPDWTKNVEYTFTGIYTFESLIKILARGFCLEDFTFLRDPWNWLD 195
Human 196 FTVITFAYVTEFVDLGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKKLSDVMILTVFCLS 260
Human 261 VFALIGLQLFMGNLRNKCLQWPPDNSSFEINITSFFNNSLDGNGTTFNRTVSIFNWDEYIEDKSH 325
Human 326 FYFLEGQNDALLCGNSSDAGQCPEGYICVKAGRNPNYGYTSFDTFSWAFLSLFRLMTQDFWENLY 390
Human 391 QLTLRAAGKTYMIFFVLVIFLGSFYLINLILAVVAMAYEEQNQATLEEAEQKEAEFQQMLEQLKK 455
Human 456 QQEEAQAAAAAASAESRDFSGAGGIGVFSESSSVASKLSSKSEKELKNRRKKKKQKEQSGEEEKN 520
Human 521 D--RVRKSESEDSIRRKGFRFSLEGSRLTYEKRFSSPHQSLLSIRGSLFSPRRNSRASLFSFRGR 583
Human 584 AKDIGSENDFADDEHSTFEDNDSRRDSLFVPHRHGERRHSNVSQASRASRVLPILPMNGKMHSAV 648
Human 649 DCNGVVSLVGGPSTLTS-AGQLLPE-----------GTTTETEIRKRRSSSYHVSMDLLEDPTSR 701
Human 702 QRAMSIASILTNTMEELEESRQKCPPCWYKFANMCLIWDCCKPWLKVKHLVNLVVMDPFVDLAIT 766
Human 767 ICIVLNTLFMAMEHYPMTEQFSSVLSVGNLVFTGIFTAEMFLKIIAMDPYYYFQEGWNIFDGFIV 831
Human 832 SLSLMELGLANVEGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFA 896
Human 897 VVGMQLFGKSYKECVCKISNDCELPRWHMHDFFHSFLIVFRVLCGEWIETMWDCMEVAGQTMCLT 961
Human 962 VFMMVMVIGNLVVLNLFLALLLSSFSSDNLAATDDDNEMNNLQIAVGRMQKGIDFVKRKIREFIQ 1026
Human 1027 KAFVRKQKALDEIKPLEDLNNKKDSCISNHTTIEIGKDLNYLKDGNGTTSGIGSSVEKYVVDESD 1091
Human 1092 YMSFINNPSLTVTVPIAVGESDFENLNTEEFSSESDMEESKEKLNATSSSEGSTVDIGAP----- 1151
Human 1152 AEGEQPEVEPEESLEPEACFTEDCVRKFKCCQISIEEGKGKLWWNLRKTCYKIVEHNWFETFIVF 1216
Human 1217 MILLSSGALAFEDIYIEQRKTIKTMLEYADKVFTYIFILEMLLKWVAYGFQVYFTNAWCWLDFLI 1281
Human 1282 VDVSLVSLTANALGYSELGAIKSLRTLRALRPLRALSRFEGMRVVVNALLGAIPSIMNVLLVCLI 1346
Human 1347 FWLIFSIMGVNLFAGKFYHCINYTTGEMFDVSVVNNYSECKALIESNQTARWKNVKVNFDNVGLG 1411
Human 1412 YLSLLQVATFKGWMDIMYAAVDSRNVELQPKYEDNLYMYLYFVIFIIFGSFFTLNLFIGVIIDNF 1476
Human 1477 NQQKKKFGGQDIFMTEEQKKYYNAMKKLGSKKPQKPIPRPANKFQGMVFDFVTKQVFDISIMILI 1541
Human 1542 CLNMVTMMVETDDQSQEMTNILYWINLVFIVLFTGECVLKLISLRYYYFTIGWNIFDFVVVILSI 1606
Human 1607 VGMFLAELIEKYFVSPTLFRVIRLARIGRILRLIKGAKGIRTLLFALMMSLPALFNIGLLLFLVM 1671
Human 1672 FIYAIFGMSNFAYVKREVGIDDMFNFETFGNSMICLFQITTSAGWDGLLAPILNSGPPDCDPDKD 1736
Human 1737 HPGSSVKGDCGNPSVGIFFFVSYIIISFLVVVNMYIAVILENFSVATEESAEPLSEDDFEMFYEV 1801
Human 1802 WEKFDPDATQFIEFAKLSDFADALDPPLLIAKPNKVQLIAMDLPMVSGDRIHCLDILFAFTKRVL 1866
Human 1867 GESGEMDALRIQMEERFMASNPSKVSYEPITTTLKRKQEEVSAIIIQRAYRRYLLKQKVKKVSSI 1931
Human 1932 YKKDKGKECDGTPIKEDTLIDKLNENSTPEKTDMTPSTTSPPSYDSVTKPEKEKFEKDKSEKEDK 1996
Human 1997 GKDIRESKK 2005 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
SCN2A | NP_001035232.1 | I. {ECO:0000305} | 111..456 | 297/345 (86%) | |
Ion_trans | 150..435 | CDD:278921 | 241/285 (85%) | ||
Na_trans_cytopl | 514..630 | CDD:288761 | 95/118 (81%) | ||
II. {ECO:0000305} | 741..1013 | 246/272 (90%) | |||
Ion_trans | 776..971 | CDD:278921 | 178/195 (91%) | ||
Na_trans_assoc | 997..1203 | CDD:284034 | 154/211 (73%) | ||
III. {ECO:0000305} | 1190..1504 | 283/314 (90%) | |||
Ion_trans | 1225..1482 | CDD:278921 | 230/257 (89%) | ||
Na_channel_gate | 1474..1526 | CDD:240441 | 49/52 (94%) | ||
IV. {ECO:0000305} | 1513..1811 | 275/298 (92%) | |||
Ion_trans | 1548..1786 | CDD:278921 | 221/238 (93%) | ||
GPHH | 1798..1853 | CDD:293510 | 50/55 (91%) | ||
scn1a | XP_012826731.1 | Ion_trans | 150..435 | CDD:278921 | 241/285 (85%) |
Na_trans_cytopl | 512..631 | CDD:288761 | 95/119 (80%) | ||
Ion_trans | 790..985 | CDD:278921 | 178/195 (91%) | ||
Na_trans_assoc | 1011..1222 | CDD:284034 | 154/211 (73%) | ||
Ion_trans | 1244..1498 | CDD:278921 | 230/257 (89%) | ||
Na_channel_gate | 1490..1542 | CDD:240441 | 49/52 (94%) | ||
Ion_trans | 1564..1802 | CDD:278921 | 221/238 (93%) | ||
GPHH | 1814..1869 | CDD:293510 | 50/55 (91%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | E1_KOG2301 | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 1 | 1.010 | ||||
OrthoDB | 1 | 1.010 | D10241at32523 | |||
OrthoFinder | 1 | 1.000 | FOG0000322 | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 0 | 0.000 | Not matched by this tool. | |||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 1 | 0.960 | ||||
5 | 4.880 |