Sequence 1: | NP_001159435.1 | Gene: | SCN1A / 6323 | HGNCID: | 10585 | Length: | 2009 | Species: | Homo sapiens |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_593894.1 | Gene: | cch1 / 2542812 | PomBaseID: | SPAC6F6.01 | Length: | 1854 | Species: | Schizosaccharomyces pombe |
Alignment Length: | 2054 | Identity: | 394/2055 (19%) |
---|---|---|---|
Similarity: | 718/2055 (35%) | Gaps: | 698/2055 (34%) |
Human 62 PFIYGDIPP-------EMVSEPLEDLDPYYINKKTFIVLNKGKAIFRFSATSALYILTPFNPLRK 119
Human 120 IAIKILVHSLFSMLIMCTILTNCVFMTM--SNPPDWTKNVEYTFTGI---YTFESLIKIIARGFC 179
Human 180 LE------DF------------TFLRDPWNWLDFTVITFAYVTEFVDLGNVSALRTFRV---LRA 223
Human 224 LKTISVIPGLKTIVGALIQSVKKLSDVMILTVFCLSVFALIGLQLFMGNLRNKCI-------QWP 281
Human 282 PTNASLEEHSIEKNITVNYNGTLINETVFEFDWKSYIQDSRYHYFLEGFLDALLCGNSSDAGQCP 346
Human 347 EGYMCVKAG-----RNPNYGYTSFDTFSWAFLSLFRLMTQD-FWENLYQLTLRAAGKTYMIFFVL 405
Human 406 VIFLGSFYLINLILAVVAMAYEEQNQATLEEAEQKEAEFQQMIEQLKKQQEAAQQAATATASEHS 470
Human 471 REPSAAGRLSDSSSEASKLSSKSAKERRNRRKKRKQKEQSGGEEKDEDEFQKSESEDSIRRKGFR 535
Human 536 FSIEGNRLTYEKRYSSPHQSLLSIRGSLFSPRRNSRTSLFSFRGRAKDVGSENDFADDEHSTFED 600
Human 601 NESRRDSLFVPRRHGERRNSNLSQTSRSSRMLAVFPANGKMHSTVDCNGVVSLVGGPSVPTSPVG 665
Human 666 QLLPEVIIDKPATDDNGTTTETEMRKRRSSSFHVSMDFLEDPSQRQRAMSIASILTNTVEELEES 730
Human 731 RQKCPPCWYKFSNIFLIWDCSPYWLKVKHVVNLVVMDPFVDLAITICIVLNTLFMAMEHYPMTDH 795
Human 796 FNNVLTVGN--LVFTG----IFTAEMFLKIIAMDPYY--YFQEGWNIFDGFIVTLSLVELGLANV 852
Human 853 EGLSV----LRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQLF- 912
Human 913 -----GKSYKDCVCKIASDCQLPRWHMNDFFHSFLIVFRVLCGE-WIETMWDCMEVAGQAMCL-- 969
Human 970 -------TVFMMVMVIGNLVVLNLFLALLLSSFSADNLAATDDDNEMNNLQIAVDRMHKGV--AY 1025
Human 1026 VKRKIYEFIQQSFIRKQKILDEIKPLDDLNNKKDSCMSNHTAEIGKDLDYLKDVNGTTS------ 1084
Human 1085 ---GIGTGSSVEKYIIDE--SDYMSFI--NNPSLTVTVPIAVG---ESDFENLNTEDFSSESDLE 1139
Human 1140 ESKEKLNESSSSSEGSTVDIGAPVEEQP-------VVEPEETLEPEACFTEGCVQRFKCCQINVE 1197
Human 1198 EGRGKQWWNLR--RTCFRIVEHNWFETFIVFMILLSSGALAFEDIY--IDQRKTIKTMLEYA--- 1255
Human 1256 --DKVFTYIFILEMLLKWVAYGY----QTYFTNAWCWLDFLIVDVSLVSLTANALGYSELGAIKS 1314
Human 1315 LRTLRALRPLRALSRFE-GMRVVVNALLGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKFYHCIN 1378
Human 1379 TTTGDRFDIEDVNNHTDCLKLIERNETAR---------WKN-VKVNFDNVGFGYLSLLQVATFKG 1433
Human 1434 WMDIMYAAVDSRNVELQPKYEESLYMYLYFVIFIIFGSFFTLNLFIGVIIDNFNQQKKKFGGQDI 1498
Human 1499 FMTEEQKKYYNAMKKLGSKKPQK-PIPRPGNKFQGMVFDF------VTRQVFDISIMILICLNMV 1556
Human 1557 TMMVETDDQSEYVTTILSRINLVFIVL---FTGECVLKLISLRHYYFTIG-WNIFDFVVVILSIV 1617
Human 1618 GMFLAELIEKYFVSPTLFRVIRLARIGRILRLIKGAKGIRTLLFALMMSLPALFNIGLLLFLVMF 1682
Human 1683 I-YAIFGMSNFAYVKREVGIDDMFNFETFGNSMICLFQITTSAGWDGLLAPILNSKPPDCDPNKV 1746
Human 1747 NPGSSVKGDCGNPSVGIFFFVSYIIISFLVVVNMYIAVILENFS-VATEESA-EPLSEDDFEMFY 1809
Human 1810 EVWEKFDPDATQFMEFEKLSQFAAALEPPLNLPQPNKLQLIAMDLPMVSGDRIHCLDILFAFTKR 1874
Human 1875 VLGESGEMDALRIQMEERFMASNPSKVSYQPITTTLKRKQEEVSAVIIQRAYRRHLLKRTVKQAS 1939
Human 1940 FTYNKNKIKGGANLLIKEDMIIDRINENSITEKTDLTMS 1978 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
SCN1A | NP_001159435.1 | I. {ECO:0000305} | 110..454 | 77/383 (20%) | |
Ion_trans | 127..433 | CDD:306908 | 73/345 (21%) | ||
Na_trans_cytopl | 510..705 | CDD:314757 | 7/195 (4%) | ||
II. {ECO:0000305} | 750..1022 | 63/300 (21%) | |||
Ion_trans | 767..980 | CDD:306908 | 50/241 (21%) | ||
Na_trans_assoc | 1006..1213 | CDD:310839 | 36/234 (15%) | ||
III. {ECO:0000305} | 1200..1514 | 77/338 (23%) | |||
Ion_trans | 1217..1492 | CDD:306908 | 71/297 (24%) | ||
Na_channel_gate | 1484..1536 | CDD:240441 | 13/53 (25%) | ||
IV. {ECO:0000305} | 1523..1821 | 88/311 (28%) | |||
Ion_trans | 1540..1796 | CDD:306908 | 73/262 (28%) | ||
S1-S2 loop of repeat IV. {ECO:0000250|UniProtKB:A2APX8} | 1561..1571 | 2/10 (20%) | |||
S3b-S4 loop of repeat IV. {ECO:0000250|UniProtKB:A2APX8} | 1619..1636 | 5/17 (29%) | |||
GPHH | 1800..1863 | CDD:318993 | 11/63 (17%) | ||
cch1 | NP_593894.1 | Ion_trans | 201..485 | CDD:278921 | 68/321 (21%) |
Ion_trans | 533..748 | CDD:278921 | 56/253 (22%) | ||
Ion_trans | 968..1220 | CDD:278921 | 63/265 (24%) | ||
Ion_trans | 1289..1517 | CDD:278921 | 68/243 (28%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Hieranoid | 1 | 1.000 | ||||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | 0.966 | Consistency score | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
2 | 1.910 |