DRSC/TRiP Functional Genomics Resources

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Protein Alignment ACTB and Arp1

DIOPT Version :10

Sequence 1:NP_001092.1 Gene:ACTB / 60 HGNCID:132 Length:375 Species:Homo sapiens
Sequence 2:NP_524331.2 Gene:Arp1 / 41566 FlyBaseID:FBgn0011745 Length:376 Species:Drosophila melanogaster


Alignment Length:370 Identity:202/370 - (54%)
Similarity:273/370 - (73%) Gaps:7/370 - (1%)


- Green bases have known domain annotations that are detailed below.


Human     8 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIE 72
            :|:|||||:.||||||:..|:..||:.:|||:|..||.|..:.|.:||.:|:..||:|:::||:|
  Fly    12 VVIDNGSGVIKAGFAGEHIPKCRFPNYIGRPKHVRVMAGALEGDIFVGPKAEEHRGLLSIRYPME 76

Human    73 HGIVTNWDDMEKIWHHTFYNE-LRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAI 136
            |||||:|:|||:||.:.:..| |....|:||||||||||||:.||||..:..||..|.||::|::
  Fly    77 HGIVTDWNDMERIWSYIYSKEQLATFTEDHPVLLTEAPLNPRRNREKAAEFFFEGINAPALFVSM 141

Human   137 QAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFT 201
            ||||||||:||.||:|:||||||||.||||||:|:||:|:|:|:||||:|.||..::...|::|.
  Fly   142 QAVLSLYATGRVTGVVLDSGDGVTHAVPIYEGFAMPHSIMRVDIAGRDVTRYLKTLIRREGFNFR 206

Human   202 TTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEK-SYELPDGQVITIGNERFRCPEALFQPS 265
            :|||.||||.||||:||:|.:.::|     .:...|| :|:||||::..||..|||.||.||:|.
  Fly   207 STAEFEIVRSIKEKVCYLATNPQKE-----ETVETEKFAYKLPDGKIFEIGPARFRAPEVLFRPD 266

Human   266 FLGMESCGIHETTFNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKII 330
            .||.|..|||:....||.|.|:|:||.||.|.|||||:|::.|..||:..|:...:...:||:|.
  Fly   267 LLGEECEGIHDVLMYSIEKSDMDLRKMLYQNIVLSGGSTLFKGFGDRLLSELKKHSAKDLKIRIA 331

Human   331 APPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 375
            ||.||.||.|:||||||||.||::|||||:||:|.|...||||.|
  Fly   332 APQERLYSTWMGGSILASLDTFKKMWISKREYEEEGQKAVHRKTF 376

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ACTBNP_001092.1 ASKHA_NBD_actin 6..370 CDD:466823 197/363 (54%)
Arp1NP_524331.2 ASKHA_NBD_Arp1 9..375 CDD:466820 200/367 (54%)

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