DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment ACTB and Arp3

DIOPT Version :10

Sequence 1:NP_001092.1 Gene:ACTB / 60 HGNCID:132 Length:375 Species:Homo sapiens
Sequence 2:NP_523968.1 Gene:Arp3 / 38898 FlyBaseID:FBgn0262716 Length:418 Species:Drosophila melanogaster


Alignment Length:421 Identity:153/421 - (36%)
Similarity:217/421 - (51%) Gaps:61/421 - (14%)


- Green bases have known domain annotations that are detailed below.


Human     5 IAALVVDNGSGMCKAGFAGDDAPRAVFPSI--------VGRPRHQGVMVGMGQKDSYVGDEAQSK 61
            :.|.|:|.|:|..|.||||:..|:.:.||.        ||....:.:..|:...|.::||||...
  Fly     5 LPACVIDVGTGYSKLGFAGNKEPQFIIPSAIAIKESARVGDTNTRRITKGIEDLDFFIGDEAFDA 69

Human    62 RGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFET 126
            .| .::|||:.||:|.:||.||:......:..||..||:|..||||.|||...|||...:|||||
  Fly    70 TG-YSIKYPVRHGLVEDWDLMERFLEQCVFKYLRAEPEDHYFLLTEPPLNTPENREYTAEIMFET 133

Human   127 FNTPAMYVAIQAVLSLYAS-------GRT-TGIVMDSGDGVTHTVPIYEGYALPHAILRLDLAGR 183
            ||.|.:|:|:||||:|.||       .|| ||||:||||||||.:|:.|||.:...|..:.:|||
  Fly   134 FNVPGLYIAVQAVLALAASWASRSAEERTLTGIVVDSGDGVTHVIPVAEGYVIGSCIKHIPIAGR 198

Human   184 DLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVI 248
            ::|.::..:|.||..........|..:.||||.||:..|..:|.|          .|:...|:.|
  Fly   199 NITSFIQSLLREREVGIPPEQSLETAKAIKEKHCYICPDIAKEFA----------KYDTEPGKWI 253

Human   249 ----------------TIGNERFRCPEALFQPSFLGME-SCGIHETTFNSIMKCDVDIRKDLYAN 296
                            .:|.|||..||..|.|.|...: :..:.|...|.|..|.:|:|:.||.|
  Fly   254 RNFSGVNTVTKAPFNVDVGYERFLGPEIFFHPEFSNPDFTIPLSEIVDNVIQNCPIDVRRPLYNN 318

Human   297 TVLSGGTTMYPGIADRMQKEIT----------------ALAPSTMKIKIIAPPERKYSVWIGGSI 345
            .|||||:||:.....|:|::|.                .:.|..:.:::|....::|:||.|||:
  Fly   319 IVLSGGSTMFKDFGRRLQRDIKRSVDTRLRISENLSEGRIKPKPIDVQVITHHMQRYAVWFGGSM 383

Human   346 LASLSTFQQMWISKQEYDESGPSIV-HRKCF 375
            |||...|.|:..:|..|:|.||||. |...|
  Fly   384 LASTPEFYQVCHTKAAYEEYGPSICRHNPVF 414

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ACTBNP_001092.1 ASKHA_NBD_actin 6..370 CDD:466823 150/412 (36%)
Arp3NP_523968.1 ASKHA_NBD_Arp3-like 7..410 CDD:466822 151/413 (37%)

Return to query results.
Submit another query.