DRSC/TRiP Functional Genomics Resources

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Protein Alignment ACTB and Arp53D

DIOPT Version :10

Sequence 1:NP_001092.1 Gene:ACTB / 60 HGNCID:132 Length:375 Species:Homo sapiens
Sequence 2:NP_477037.2 Gene:Arp53D / 36879 FlyBaseID:FBgn0011743 Length:411 Species:Drosophila melanogaster


Alignment Length:370 Identity:241/370 - (65%)
Similarity:294/370 - (79%) Gaps:5/370 - (1%)


- Green bases have known domain annotations that are detailed below.


Human     6 AALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYP 70
            ||:|:|||||:|||||:.:|.||||||||||||||..|::.....||.:|:.|..||||||||||
  Fly    47 AAVVIDNGSGVCKAGFSPEDTPRAVFPSIVGRPRHLNVLLDSVIGDSVIGEAAARKRGILTLKYP 111

Human    71 IEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVA 135
            ||||:|.|||:||.:|.|| |..||..|.:.|.||||||||||.||||||:||||.|..||.|||
  Fly   112 IEHGMVKNWDEMEMVWQHT-YELLRADPMDLPALLTEAPLNPKKNREKMTEIMFEHFQVPAFYVA 175

Human   136 IQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSF 200
            :||||||||:|||.|||:|||||||||||||||:|||||.:|:|||||||||||.|:|.|||.:.
  Fly   176 VQAVLSLYATGRTVGIVVDSGDGVTHTVPIYEGFALPHACVRVDLAGRDLTDYLCKLLLERGVTM 240

Human   201 TTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITIGNERFRCPEALFQPS 265
            .|:|||||||:||||||||::::.:||    ......::|||||||.|.:|.|||||||||||||
  Fly   241 GTSAEREIVREIKEKLCYVSMNYAKEM----DLHGKVETYELPDGQKIVLGCERFRCPEALFQPS 301

Human   266 FLGMESCGIHETTFNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKII 330
            .||.|..||||.|.:||..||:|:|||:|||.||||||||:..|..|..:::|.:||.:::||:.
  Fly   302 LLGQEVMGIHEATHHSITNCDMDLRKDMYANIVLSGGTTMFRNIEHRFLQDLTEMAPPSIRIKVN 366

Human   331 APPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 375
            |.|:|::|||.|||:||||::||.|||...||:|.|.:|||||||
  Fly   367 ASPDRRFSVWTGGSVLASLTSFQNMWIDSLEYEEVGSAIVHRKCF 411

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ACTBNP_001092.1 ASKHA_NBD_actin 6..370 CDD:466823 234/363 (64%)
Arp53DNP_477037.2 ASKHA_ATPase-like 47..406 CDD:483947 234/363 (64%)

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