DRSC/TRiP Functional Genomics Resources

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Protein Alignment Or19a and Or88a

DIOPT Version :10

Sequence 1:NP_525013.2 Gene:Or19a / 59214 FlyBaseID:FBgn0041626 Length:387 Species:Drosophila melanogaster
Sequence 2:NP_524348.2 Gene:Or88a / 41715 FlyBaseID:FBgn0038203 Length:401 Species:Drosophila melanogaster


Alignment Length:406 Identity:79/406 - (19%)
Similarity:146/406 - (35%) Gaps:99/406 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly    33 WGRHYTAYSMV----------------------WNVTFHICIWVSFSVNLLQSNSLETFCESLCV 75
            |.|:....|||                      |::..|  .|:....|  |:..:      |.:
  Fly    32 WRRNPVDNSMVNASMVPFCLSAFLNVLFFGCNGWDIIGH--FWLGHPAN--QNPPV------LSI 86

  Fly    76 TMPHTLYMLKLINVRRMRGQMISSHWLLRLLDKRLGCDDERQIIMAGIE-------RAEFIFRTI 133
            |:..::..|.|...|:...:.::.      ||:....|...|:.|...|       |..||  .|
  Fly    87 TIYFSIRGLMLYLKRKEIVEFVND------LDRECPRDLVSQLDMQMDETYRNFWQRYRFI--RI 143

  Fly   134 FRGLA----CTVVLGIIYISASSEPT------LMYPTWIPWNWRDSTSAYL---ATAMLHTTALM 185
            :..|.    |.|.|.:..::...:.|      .:...|:|...|...:.||   :..::.||..:
  Fly   144 YSHLGGPMFCVVPLALFLLTHEGKDTPVAQHEQLLGGWLPCGVRKDPNFYLLVWSFDLMCTTCGV 208

  Fly   186 ANATLVLNLSSYPGTYLILVSVHTKALALRVSKLGYGAPLP-----------AVRMQAILVGYIH 239
            :......||.:....:|::   |...||.:.|.:.....|.           .|:.|.:|.|...
  Fly   209 SFFVTFDNLFNVMQGHLVM---HLGHLARQFSAIDPRQSLTDEKRFFVDLRLLVQRQQLLNGLCR 270

  Fly   240 DHQIILRLFKSLERSLSMTCFLQFFSTACAQCTICYFLLFGNVGIMRFMNMLFLLVILTTETLLL 304
            .:..|.::           .||  .|......::|::|..    :....::|.:...:....:|:
  Fly   271 KYNDIFKV-----------AFL--VSNFVGAGSLCFYLFM----LSETSDVLIIAQYILPTLVLV 318

  Fly   305 CYTAELPC-------KEGESLLTAVYSCNWLSQSVNFRRLLLLMLARCQIPMILVSGVIVPISMK 362
            .:|.|: |       |..|.|.:::.|..|...|..:|:..||....||....|.:..::.::|.
  Fly   319 GFTFEI-CLRGTQLEKASEGLESSLRSQEWYLGSRRYRKFYLLWTQYCQRTQQLGAFGLIQVNMV 382

  Fly   363 TFTVMIKGAYTMLTLL 378
            .||.:::.||.:.|.|
  Fly   383 HFTEIMQLAYRLFTFL 398

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Or19aNP_525013.2 7tm_6 65..372 CDD:251636 65/344 (19%)
Or88aNP_524348.2 7tm_6 75..392 CDD:251636 67/353 (19%)

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