DRSC/TRiP Functional Genomics Resources

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Protein Alignment Or19a and Or56a

DIOPT Version :10

Sequence 1:NP_525013.2 Gene:Or19a / 59214 FlyBaseID:FBgn0041626 Length:387 Species:Drosophila melanogaster
Sequence 2:NP_523796.2 Gene:Or56a / 37269 FlyBaseID:FBgn0034473 Length:419 Species:Drosophila melanogaster


Alignment Length:380 Identity:74/380 - (19%)
Similarity:153/380 - (40%) Gaps:73/380 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly    52 IWVSFSVNLLQ----SNSLETFCESLCVTMPHTLYMLKLINVRRMRGQMISSHWLLRL----LDK 108
            ||:|.::.|.:    ..:|.....|....:.:....:.:.|....|.::||   |||:    :..
  Fly    54 IWLSCALMLARVFRGYENLNDGATSYATAVQYFAVSIAMFNAYVQRDKVIS---LLRVAHSDIQN 115

  Fly   109 RLGCDDERQI---------------------IMAGI-ERAEFIFRTIFRGLACTVVLGIIYISAS 151
            .:...|.|::                     ::||: ..::.|:|::|...:   |..:..:...
  Fly   116 LMHEADNREMELLVATQAYTRTITLLIWIPSVIAGLMAYSDCIYRSLFLPKS---VFNVPAVRRG 177

  Fly   152 SE-PTLMYPTWIPWN-------------WRDSTSAYLATAMLHT--TALMANATLVLNLSSYPGT 200
            .| |.|::..: |:.             |........|..:.||  |.||....|.|.:.:....
  Fly   178 EEHPILLFQLF-PFGELCDNFVVGYLGPWYALGLGITAIPLWHTFITCLMKYVNLKLQILNKRVE 241

  Fly   201 YLILVSVHTKALALRVSKLGYGAPLPAVRMQAILVGYIHDHQIILRLFKSLERSLSMTCFLQF-- 263
            .:.:..:::|.:..|::    .:.|...:|| :...::.:...|.:..:.|:..:.:.....|  
  Fly   242 EMDITRLNSKLVIGRLT----ASELTFWQMQ-LFKEFVKEQLRIRKFVQELQYLICVPVMADFII 301

  Fly   264 FSTACAQCTICYFLLFGNVGIMRFMNMLFLLVIL-TTETLLLCY----TAELPCKEGESLLTAVY 323
            ||.     .||:......||:...|:..|:.:.| ....:|..|    |..:.|.:..||  |.:
  Fly   302 FSV-----LICFLFFALTVGVPSKMDYFFMFIYLFVMAGILWIYHWHATLIVECHDELSL--AYF 359

  Fly   324 SCNWLSQSVNFRRLLLLMLARCQIPMILVSGVIVPISMKTFTVMIKGAYTMLTLL 378
            ||.|.:..:..:::|:.|:...|.|| .:..::|.::::||..:.:|||:...||
  Fly   360 SCGWYNFEMPLQKMLVFMMMHAQRPM-KMRALLVDLNLRTFIDIGRGAYSYFNLL 413

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Or19aNP_525013.2 7tm_6 65..372 CDD:251636 66/355 (19%)
Or56aNP_523796.2 7tm_6 126..407 CDD:251636 55/297 (19%)

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