DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Or19a and Or83c

DIOPT Version :10

Sequence 1:NP_525013.2 Gene:Or19a / 59214 FlyBaseID:FBgn0041626 Length:387 Species:Drosophila melanogaster
Sequence 2:XP_319538.2 Gene:Or83c / 1279769 VectorBaseID:AGAMI1_011541 Length:393 Species:Anopheles gambiae


Alignment Length:404 Identity:71/404 - (17%)
Similarity:145/404 - (35%) Gaps:106/404 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly    33 WGRHYTAYSMVWNVTFHICIWV------SFSVNLLQSNSLETFCESLCVTMPHTLY--------- 82
            |.:.|..|..::..:.::.:.|      |.:..|.:|.|...|.....:.|.:|:.         
Mosquito    30 WKKSYRTYMSIFLCSQYLILMVYSLIIASDTFELFKSLSFLGFFFQCSLKMYYTIQQAPQYAVNF 94

  Fly    83 --MLKLINVRRMRGQMISSHWLLRLLDKRLGCDDERQIIMAGIERAEFIFRTIFRGLACTVVLGI 145
              :.:.|..|..:|.:.....:.|::|         .:::.                  |..:.:
Mosquito    95 CCLKEAIYERHSKGTLAQKTTVTRIID---------LLVLV------------------TKAISV 132

  Fly   146 IYISA----SSEPTLMY----------PTWIPWNWRDSTSAYLATAMLH-----------TTALM 185
            :|.|:    |..|..||          |.:||.....|...|..|...|           .|:.:
Mosquito   133 LYTSSLFIFSLYPAYMYFVVHVKVPIFPLYIPGINIYSAYGYGITNSFHMLIAVYGLFGALTSDI 197

  Fly   186 ANATLVLNLSSYPGTYLILVSVHTKALALRVSKLGYGAPLPAV-------RMQAILVGYIHDHQI 243
            .....|::..:|.|.:.|......:.|:   ..|.:.....||       ||:||   |.: ||.
Mosquito   198 VFIMFVVHFVTYGGLFKIECEQFDQDLS---GVLQHCEWRTAVYKTFCRQRMRAI---YQY-HQS 255

  Fly   244 ILRLFKSLERSLSMTCFLQFFSTACAQCTIC---------YFLLFGNVGIMRFMNMLFLLVILTT 299
            ::...:|::......|.:|..|  |:..|:.         ::..:|.:.|..|  .||:..::.|
Mosquito   256 VIFYLESMQECYRNICVVQVAS--CSLSTVFNLFLALTTDWYATYGFIVISVF--QLFVYCLMGT 316

  Fly   300 ETLLLCYTAELPCKEGESLLTAVYSCNWLSQSVNFRRLLLLMLARCQIPMILVSGVIVPISMKTF 364
            ...::          .|.::..:.:..|.......::....||||.|:...::...:.|::|:||
Mosquito   317 VMQIM----------NERMIDYISNLPWYMLPTEEQKQFKFMLARSQLSAEIMIRSVGPMNMETF 371

  Fly   365 TVMIKGAYTMLTLL 378
            |.:::..|:...::
Mosquito   372 TDIMQKMYSAFAMM 385

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Or19aNP_525013.2 7tm_6 65..372 CDD:251636 63/358 (18%)
Or83cXP_319538.2 None

Return to query results.
Submit another query.