DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tsp42Eb and Tsp42Ek

DIOPT Version :10

Sequence 1:NP_724525.1 Gene:Tsp42Eb / 59177 FlyBaseID:FBgn0042086 Length:222 Species:Drosophila melanogaster
Sequence 2:NP_523637.1 Gene:Tsp42Ek / 35621 FlyBaseID:FBgn0033133 Length:215 Species:Drosophila melanogaster


Alignment Length:240 Identity:65/240 - (27%)
Similarity:93/240 - (38%) Gaps:49/240 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MNCLSAMFKYLLYLLNLVFVAGGILLIVVGSIMLSTMGNFTAFDGGVNTQTIPICIIV----IGS 61
            |.|.|...|..|..||.:....|:.||.:.::.||               ..||..|:    :|.
  Fly     1 MGCTSGCVKCFLNTLNTLNALSGLSLIAIATLALS---------------KAPIAYILFLYGLGG 50

  Fly    62 VTFVVAFFGCCGTIRENACCTTIYAICMLILFGLQLALSIWIFAANDKFLSSM-GKAVDKAWDEN 125
            :.||.|..||||...||.|.|..|...:|....:.| |.|:.|...::::... .:.|...|||.
  Fly    51 IIFVSAVLGCCGICMENVCMTATYGFLLLAQLIISL-LGIFRFKFTEEYIEKFAAEEVQMKWDEE 114

  Fly   126 NAAQGYPMDALQLAFSCCGNTGYQQY-----ETVPSSCCGYKDRTKVCEAEIYSQRP----GCRQ 181
            ....| .||..|..:.|||......|     :|:|.||...:|          .|.|    ||.|
  Fly   115 LVEPG-AMDIYQTVYECCGRDSPDDYVAIGRQTLPPSCYPQED----------PQMPHYLAGCVQ 168

  Fly   182 E----FVDFWASNTDLIRWSSLIIALFELGIFIMSCCLASAMRKR 222
            :    ||..::...| ..|.:|.|.:.   :.|.:..|....||:
  Fly   169 KSSENFVVLFSYAHD-TNWIALGITIL---MMIAAFYLVGRFRKQ 209

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tsp42EbNP_724525.1 Tetraspanin 8..216 CDD:459767 59/225 (26%)
Tsp42EkNP_523637.1 Tetraspanin 8..>132 CDD:459767 39/140 (28%)
tetraspanin_LEL 94..174 CDD:239401 22/90 (24%)

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