DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tsp42Eb and Tsp3A

DIOPT Version :10

Sequence 1:NP_724525.1 Gene:Tsp42Eb / 59177 FlyBaseID:FBgn0042086 Length:222 Species:Drosophila melanogaster
Sequence 2:NP_525054.2 Gene:Tsp3A / 31244 FlyBaseID:FBgn0040334 Length:304 Species:Drosophila melanogaster


Alignment Length:260 Identity:75/260 - (28%)
Similarity:118/260 - (45%) Gaps:61/260 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 LSAMFKYLLYLLNLVF-VAGGILLIV------------VGSIMLSTMGNFTAFDGGVNTQTIPIC 55
            :|...||:::|||.|| :.||:||.:            .||:.|.   ||  :|..:|   |.:.
  Fly    39 VSQCVKYMIFLLNFVFWLFGGLLLGIGVYAFRDKWEDANGSVRLE---NF--YDVFLN---ISLV 95

  Fly    56 IIVIGSVTFVVAFFGCCGTIRENACCTTIYAICMLILFGLQLALSIWIFAANDKFLSSMGK---- 116
            :|:.|:|.|:|:|.||.|.:|||......|::|:|:.|.|::|::|..|.......:.:.|    
  Fly    96 MILAGTVIFLVSFSGCVGALRENTFLLKFYSMCLLLFFLLEMAIAIVCFVCPQYMNTFLEKQFTH 160

  Fly   117 AVDKAWDENNAAQGYPMDALQLAFSCCG--NTGYQQYET---------------VPSSC------ 158
            .:..::.::...|.: :|..|..|.|||  |:|||.:..               ||.||      
  Fly   161 KIIHSYRDDPDLQNF-IDFAQQEFKCCGLSNSGYQDWSKNEYFNCSSPSVEKCGVPYSCCINATD 224

  Fly   159 ---------CGY-KDRTKVCEAEIYSQRPGCRQEFVDFWAS-NTDLIRWSSLIIALFELGIFIMS 212
                     ||| .....|.||.......|| .|.|..||. |..:|..::|.|||.:|.:..::
  Fly   225 ISSGLVNIMCGYGVQNAPVPEATKLIWTSGC-IEIVRVWAEHNLYVIAGNALGIALIQLLVIYLA 288

  Fly   213  212
              Fly   289  288

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tsp42EbNP_724525.1 Tetraspanin 8..216 CDD:459767 74/256 (29%)
Tsp3ANP_525054.2 Tetraspanin 43..>187 CDD:459767 45/152 (30%)
penumbra_like_LEL 144..267 CDD:239411 29/124 (23%)

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