DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG18754 and CG4613

DIOPT Version :10

Sequence 1:NP_652652.3 Gene:CG18754 / 59145 FlyBaseID:FBgn0042106 Length:341 Species:Drosophila melanogaster
Sequence 2:NP_648707.2 Gene:CG4613 / 39586 FlyBaseID:FBgn0036427 Length:374 Species:Drosophila melanogaster


Alignment Length:269 Identity:86/269 - (31%)
Similarity:126/269 - (46%) Gaps:57/269 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    96 TCGQTTPVFRDRGAENAELNEYPWMVLLLYENRL----SLI--RYVLTAAHCVIGGYLTQNDLVL 154
            ||| ...|.|..|......|:|||:..::....|    :||  ||||||||||.|  :....:.:
  Fly   128 TCG-VPNVNRIVGGTQVRTNKYPWIAQIIRGTFLFCGGTLINDRYVLTAAHCVHG--MDMRGVSV 189

  Fly   155 KSVRLGESTTDCITSESRCPHLDV--EVGQTTVHQGFTSSGGTYRNDIALLRLQFPVRYTKKIQP 217
            :.::|..|:|          ||.|  .|.....|.|:...  :..:|||||||..|:.....::|
  Fly   190 RLLQLDRSST----------HLGVTRSVAFAHAHVGYDPV--SLVHDIALLRLDQPIPLVDTMRP 242

  Fly   218 ICLLDAEFP---LQDLNLQ---ISGWDPTKSSQTLITSTVKER------NPADCLNRYPSFRSA- 269
            .||     |   ||:.:.|   ::||..::...:  ||:|.:.      ..|.|  |..|:||. 
  Fly   243 ACL-----PSNWLQNFDFQKAIVAGWGLSQEGGS--TSSVLQEVVVPIITNAQC--RATSYRSMI 298

  Fly   270 --SQVCAGGQRKG--DTCAGISGSPVMGIMGSGVDEFVF-LAGIASYGQQYCYSAGIPGVYTKIG 329
              :.:|||..:.|  |.|.|.||.|::      |.:.:| |||:.|:|.. |.....|||||::.
  Fly   299 VDTMMCAGYVKTGGRDACQGDSGGPLI------VRDRIFRLAGVVSFGYG-CAKPDAPGVYTRVS 356

  Fly   330 HFSEWIKAN 338
            .:.|||..|
  Fly   357 RYLEWIAVN 365

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG18754NP_652652.3 CLIP 36..84 CDD:463440
Tryp_SPc 108..338 CDD:238113 80/255 (31%)
CG4613NP_648707.2 Tryp_SPc 136..362 CDD:214473 79/255 (31%)
Blue background indicates that the domain is not in the aligned region.

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