DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG18754 and CG30088

DIOPT Version :10

Sequence 1:NP_652652.3 Gene:CG18754 / 59145 FlyBaseID:FBgn0042106 Length:341 Species:Drosophila melanogaster
Sequence 2:NP_725488.3 Gene:CG30088 / 246447 FlyBaseID:FBgn0050088 Length:281 Species:Drosophila melanogaster


Alignment Length:303 Identity:91/303 - (30%)
Similarity:132/303 - (43%) Gaps:85/303 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly    80 VYVC---CPELGD------VLPNKQTCGQT------TPVFRDRGAENAELNEYPWMVLLLYENRL 129
            :|:|   |..|.:      ::|   :||.:      |.:.|   .:.|.|...|:|..|.|.:.:
  Fly    10 IYICMCVCLVLQEQVAANFLIP---SCGVSYESNVATRIVR---GKEAMLKSAPFMAYLYYSSEI 68

  Fly   130 ----SLI--RYVLTAAHCVIGGYLTQNDLVLKSVRLGE----STTDCITSESRCPHLDVEVGQTT 184
                ::|  ||:|||||| :..||        .|||||    ...||.......|..:.::...|
  Fly    69 HCGGTIISSRYILTAAHC-MRPYL--------KVRLGEHDITRNPDCQGGSCSPPAEEFDIVLAT 124

  Fly   185 VHQGFTSSGGTYRNDIALLRLQFPVRYTKKIQPICLLDAEFPLQDLN---------LQISGWDPT 240
            .::.|..   ...||||||:|...:|:...||||||:        ||         .|..||..|
  Fly   125 KYKRFDR---FLANDIALLKLSRNIRFNVHIQPICLI--------LNPAAAPNVHEFQAFGWGQT 178

  Fly   241 KS--SQTLITSTVKERNPADCLNRYPSFRSAS---------QVCAGGQRKGDTCAGISGSP-VMG 293
            ::  |..::.:||        |.||.:....|         |:|.|.| ..|||:|.||.| |..
  Fly   179 ETNHSANVLQTTV--------LTRYDNRHCRSVLSMPITINQLCVGFQ-GSDTCSGDSGGPLVTK 234

  Fly   294 IMGSGVDEFVFLAGIASYGQQYCYSAGIPGVYTKIGHFSEWIK 336
            :...||..::.| ||.|:|...|.|   |||||.:.::..||:
  Fly   235 VNYDGVWRYLQL-GIVSFGDDKCQS---PGVYTYVPNYIRWIR 273

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG18754NP_652652.3 CLIP 36..84 CDD:463440 2/6 (33%)
Tryp_SPc 108..338 CDD:238113 82/260 (32%)
CG30088NP_725488.3 Tryp_SPc 45..273 CDD:238113 82/263 (31%)

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