DRSC/TRiP Functional Genomics Resources

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Protein Alignment: RAP2B and Rap1

Sequence 1:NP_002877.2 Gene:RAP2B HGNCID:9862 Length:183 Species:Homo sapiens
Sequence 2:NP_001189023.1 Gene:Rap1 FlyBaseID:FBgn0004636 Length:184 Species:Drosophila melanogaster

Alignment Length:189 Identity:113/190 (59%)
Similarity:143/190 (75%) Gaps:11/190 (6%)


Human     1 MREYKVVVLGSGGVGKSALTVQFVTGSFIEKYDPTIEDFYRKEIEVDSSPSVLEILDTAGTEQFA 65
            |||||:||||||||||||||||||...|:|||||||||.|||::|||....:||||||||||||.
  Fly     1 MREYKIVVLGSGGVGKSALTVQFVQCIFVEKYDPTIEDSYRKQVEVDGQQCMLEILDTAGTEQFT 65

Human    66 SMRDLYIKNGQGFILVYSLVNQQSFQDIKPMRDQIIRVKRYERVPMILVGNKVDLEGEREVSYGE 130
            :|||||:||||||:||||:..|.:|.|::.:|:||:|||..:.|||:|||||.|||.||.|....
  Fly    66 AMRDLYMKNGQGFVLVYSITAQSTFNDLQDLREQILRVKDTDDVPMVLVGNKCDLEEERVVGKEL 130

Human   131 GKALAEEWSCPFMETSAKNKASVDELFAEIVRQMNYAA------QPNGDEGCCSACVIL 183
            ||.||.:::|.|||||||.|.:|:::|.::|||:|..:      :|..     |.||:|
  Fly   131 GKNLATQFNCAFMETSAKAKVNVNDIFYDLVRQINKKSPEKKQKKPKK-----SLCVLL 184

Known Domains:


GeneSequenceDomainRegion External IDIdentity
RAP2BNP_002877.2 Rap2 3..165 CDD:133376 105/162 (65%)
Effector region. {ECO:0000305} 32..40 7/8 (88%)
Rap1NP_001189023.1 Rap1 3..165 CDD:133375 105/162 (65%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 D1353024at2759
OrthoFinder 1 1.000 FOG0000044
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
22.010

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