DRSC/TRiP Functional Genomics Resources

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Protein Alignment PTGS2 and cd

DIOPT Version :10

Sequence 1:NP_000954.1 Gene:PTGS2 / 5743 HGNCID:9605 Length:604 Species:Homo sapiens
Sequence 2:NP_651081.1 Gene:cd / 42681 FlyBaseID:FBgn0263986 Length:830 Species:Drosophila melanogaster


Alignment Length:574 Identity:118/574 - (20%)
Similarity:197/574 - (34%) Gaps:159/574 - (27%)


- Green bases have known domain annotations that are detailed below.


Human   102 VLTSRSHLIDSPPTYNADYGYKSWEAFSNLSYYTRALPPVPDDCPTPLGVKGKKQLPDSNEIVEK 166
            |..::.|    |.||.|          |.:.|.....|...|....| .|....:||.:.::  .
  Fly   224 VCNNKQH----PRTYGA----------SMVPYRRMVSPDYADGIAAP-RVSHHGRLPPARQV--S 271

Human   167 LLLRRKFIPDPQGSNMMFAFFAQHFTHQFFKT--------------------DH----------- 200
            |.:.|..........:|.|.|.|...|....|                    .|           
  Fly   272 LKIHRSSYETDSNFTVMLAVFGQFMDHDITATSLTTSQEGESIDCCVAATREQHPECYPVDILPD 336

Human   201 ---------------KRGPAFTNGLGHGVDLNH---------IYGETLARQRKLRLFKDGKMKYQ 241
                           :..||.|...|..:.||.         :||....||.:||.|.:|.::..
  Fly   337 DPYYKQYNISCMNFVRSAPAPTGRFGPRMQLNQATAFIDASVVYGNLEQRQNQLRSFINGSLRMF 401

Human   242 II-DGEMYPPTVKDTQAEMIYPPQVPEHLRFAVGQEVF---------GLVPGLMMYATIWLREHN 296
            :. ||....| :....|:.....|:..     :|:..|         .|:  |.....:|.|.||
  Fly   402 VTDDGRQLLP-ISSNPADGCNRVQMTR-----LGKYCFESGDDRANENLL--LTSMHLLWARHHN 458

Human   297 RVCDVLKQEHPEWGDEQLFQTSRLILIGETIKIVIEDYVQHLSGYHFKL---------------K 346
            .:...|::::|.|.||:|:|.:|.||..:...|...:::..|.|.:...               .
  Fly   459 YLARQLQEQNPHWEDERLYQEARKILGAQMAHITYNEFLPVLLGKNISEAKGLLPAKHNLNAPDT 523

Human   347 FDPEL------LFNKQFQYQNRIAAEFNTLYHWHPLLPDTFQIH-----DQKYNYQQFIYNN-SI 399
            :|||:      .|         .||.|...   |.|||..|.|.     .:.....:.::|. |:
  Fly   524 YDPEVDPSIANCF---------AAAAFRFA---HTLLPGLFNISRDNSTPEAIELHKMLFNPFSL 576

Human   400 LLEHGI------------TQFVESFTRQIAGRVAGGR---NVPPAVQKVSQASIDQSRQMKYQSF 449
            ..||||            .|....|:.::..::..|.   .||.....:...:|.:.|.....|:
  Fly   577 WAEHGIDHALMTAANTPVMQVDRFFSLEVTQKLFEGTAEDRVPLCGLDLVSLNIQRGRDHGIPSY 641

Human   450 NEYRKRFMLKPYESFEELTGEKEMSAELEA---LYGDIDAVELYPALLVEKPRPDAIFGETMVEV 511
            ..:|:...|...:::||::...: :|.|::   :|.....|::|...|.|.|...||||..:..:
  Fly   642 PVFRRHCRLPTVDTWEEMSQAID-NATLDSIRQIYESPQDVDVYTGALSEPPLDGAIFGPLLSCM 705

Human   512 GAPFSLKGLMGNVICSPAYW-----KPSTFGGEVGFQIINTASIQSLICNNVKG 560
            .:...|:..:|:     ::|     .|..|......:|..| |:.::||.|..|
  Fly   706 VSDQFLRLKLGD-----SHWYERKMGPQKFTKAQLAEIYKT-SLAAIICRNSDG 753

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PTGS2NP_000954.1 EGF_CA 19..54 CDD:238011
prostaglandin_endoperoxide_synthase 75..562 CDD:188648 118/574 (21%)
cdNP_651081.1 An_peroxidase 218..762 CDD:460804 118/574 (21%)
Blue background indicates that the domain is not in the aligned region.

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