Protein Alignment Rpb12 and rpb-12

DIOPT Version :9

• Sequence 1: NP_001097319.1
• Gene: Rpb12 / 5740790
• FlyBaseID: FBgn0262954
• Length: 57
• Species: Drosophila melanogaster
• Sequence 2: NP_501593.1
• Gene: rpb-12 / 184886
• WormBaseID: WBGene00009078
• Length: 62
• Species: Caenorhabditis elegans
• Alignment Length: 45
• Identity: 32/45 - (71%)
• Similarity: 41/45 - (91%)
• Gaps: 0/45 - (0%)

  Fly    13 AMTYICGECHHENEMRPRDPIRCRECGYRIMYKKRTKRLVVFDAR 57
            :|.|||||||.|||::|:|.||||||||||:||||.::|:|:|||
 Worm    18 SMIYICGECHAENEIKPKDAIRCRECGYRILYKKRCRKLMVYDAR 62

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Rpb12	NP_001097319.1	RPOLCX	14..57	CDD:128906	30/42 (71%)
rpb-12	NP_501593.1	RPOLCX	19..62	CDD:128906	30/42 (71%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	1	0.930	-	-		C160162506
Domainoid	1	1.000	67	1.000	Domainoid score	I6487
eggNOG	1	0.900	-	-		E1_COG1996
Hieranoid	1	1.000	-	-
Homologene	0	0.000	Not matched by this tool.
Inparanoid	1	1.050	81	1.000	Inparanoid score	I3792
Isobase	0	0.000	Not matched by this tool.
OMA	1	1.010	-	-		QHG57717
OrthoDB	1	1.010	-	-		D1620152at2759
OrthoFinder	1	1.000	-	-		FOG0004951
OrthoInspector	1	1.000	-	-		oto18442
orthoMCL	1	0.900	-	-		OOG6_103748
Panther	1	1.100	-	-	LDO	PTHR12056
Phylome	1	0.910	-	-
RoundUp	1	1.030	-	avgDist	Average_Evolutionary_Distance	R1178
SonicParanoid	1	1.000	-	-		X3493
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	1	0.960	-	-
	15	14.800