DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG34316 and Jhbp4

DIOPT Version :10

Sequence 1:NP_001097798.1 Gene:CG34316 / 5740757 FlyBaseID:FBgn0085345 Length:267 Species:Drosophila melanogaster
Sequence 2:NP_650518.1 Gene:Jhbp4 / 41948 FlyBaseID:FBgn0038394 Length:270 Species:Drosophila melanogaster


Alignment Length:182 Identity:43/182 - (23%)
Similarity:81/182 - (44%) Gaps:17/182 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly    44 CHP-----IPNLGLPALDPLQLGPAETELNNKYLVDFTGSIDNFQLHGLSDFDVPALSLSPVPGL 103
            |.|     ||.:|:.:.:||.:........:..|| .:|...:..:.|.|:..|...||.....|
  Fly    69 CFPALAAGIPEIGVKSFEPLNIDQVSVSKGSGNLV-LSGGFQDLVIRGPSNATVRRASLDLERRL 132

  Fly   104 KNTINVTLPLTYFKSLYTAKGSLAYILNLAGDGNAETSITNFSILISFR--LRSVSP-----LAI 161
            .| ..:.||....::.|..||:: .:|.|.|.|:...::.|....:..|  ||:.:.     :.|
  Fly   133 LN-FELELPRLRIRAKYNLKGNI-LLLPLVGSGDVAMALKNVHTTVYTRISLRNETRTGDEIIHI 195

  Fly   162 SSLQIELRLGGLWINFDNLMEEDRI-NDFIHALVNEMGVELLGDVW-DYEQG 211
            ..:::...:|.:.|:..||...:.| ...|::.:|:.|.|::.::. |.|.|
  Fly   196 DEMKVGFDVGAMRIHLKNLFNGNEILAASINSFLNQNGKEVIAELRPDLELG 247

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG34316NP_001097798.1 JHBP 32..231 CDD:472279 43/182 (24%)
Jhbp4NP_650518.1 JHBP 42..270 CDD:214779 43/182 (24%)

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