DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG34448 and Lipc

DIOPT Version :10

Sequence 1:NP_001097059.1 Gene:CG34448 / 5740554 FlyBaseID:FBgn0085477 Length:344 Species:Drosophila melanogaster
Sequence 2:XP_006243421.1 Gene:Lipc / 24538 RGDID:3009 Length:510 Species:Rattus norvegicus


Alignment Length:382 Identity:109/382 - (28%)
Similarity:165/382 - (43%) Gaps:82/382 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MSIYSTLILLLTIVSGFCKGENHTRGWLPEFCVVGEQK-CPNSRVSFWLYTNQTRDDPIQLDPLN 64
            :.|..:|:|.:.|.|..|.....|..:........|:| .....:.|.|:.:::.....||.|.:
  Rat     5 LQISVSLVLCIFIQSSACGQGVGTEPFGRNLGATEERKPLQKPEIRFLLFKDESDRLGCQLRPQH 69

  Fly    65 P---QKDVFQPRLPLKILIHGFIGNRNLT-----PNLEVRDVLLQT--------------QPINV 107
            |   |:..|....||.::|||:.|:.:.|     .|....|.||:|              ||:||
  Rat    70 PETLQECGFNSSHPLVMIIHGWSGSESATVGKDSDNDSQVDGLLETWIWKIVGALKSRQSQPVNV 134

  Fly   108 ISVDYGTLVRWPCYYPWAVNNAPIVSECLAQMINNLISAGISRREDIHLIGFSLGAQVAGMVANY 172
            ..||:.:|...  :|..||.|..:|.:.:|.::..|..:....|..:||||:||||.|:|...:.
  Rat   135 GLVDWISLAYQ--HYAIAVRNTRVVGQEVAALLLWLEESMKFSRSKVHLIGYSLGAHVSGFAGSS 197

  Fly   173 V--SQPLARITGLDPAGPGFMMQPSLQQKLDASDADFVDIIHTDPFFFS---------MLPPMGH 226
            :  .:.:.||||||||||.| ...|..::|...||:|||.|||    |:         :..|:.|
  Rat   198 MGGKRKIGRITGLDPAGPMF-EGTSPNERLSPDDANFVDAIHT----FTREHMGLSVGIKQPIAH 257

  Fly   227 ADFYPNLDQLNQRGCSYISNWRF------------YNCNHYRAAVYYGESI----ISERGFWAQQ 275
            .|||||.... |.||.::..::.            ..|.|.|:...:.:|:    :...||   |
  Rat   258 YDFYPNGGSF-QPGCHFLELYKHIAEHGLNAITQTIKCAHERSVHLFIDSLQHSNLQNTGF---Q 318

  Fly   276 CGGWFDFFSQ---------RCSHYSNMPNTQMGYFVSED---ASGSYFLTTHEVAPF 320
            |.. .|.|||         ||:        .:||.:..|   .|.:.||.|...:||
  Rat   319 CSN-MDSFSQGLCLNCKKGRCN--------SLGYDIRRDRPRKSKTLFLITRAQSPF 366

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG34448NP_001097059.1 Pancreat_lipase_like 44..316 CDD:238363 98/332 (30%)
LipcXP_006243421.1 Lipase 18..366 CDD:395099 103/367 (28%)
PLAT_LPL 369..504 CDD:238856
Blue background indicates that the domain is not in the aligned region.

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