DRSC/TRiP Functional Genomics Resources

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Protein Alignment Fili and Lrrtm3

DIOPT Version :10

Sequence 1:NP_001369108.1 Gene:Fili / 5740472 FlyBaseID:FBgn0085397 Length:789 Species:Drosophila melanogaster
Sequence 2:NP_848793.1 Gene:Lrrtm3 / 216028 MGIID:2389177 Length:582 Species:Mus musculus


Alignment Length:403 Identity:93/403 - (23%)
Similarity:162/403 - (40%) Gaps:96/403 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly    22 PVLLLLLLTLVILPPETTAFCPSKCQCLGGEANSRALCVDAALEDVPIQLNPETKYINLTVNRIR 86
            |.:||.:|:      .....||..|:|.|    ....|....|:::|..::.....::|..|.::
Mouse    20 PTVLLTMLS------SAERGCPKGCRCEG----KMVYCESQKLQEIPSSISAGCLGLSLRYNSLQ 74

  Fly    87 TLEFSLPFYMKLEILDLSQNIIETLGSKNFEYQSELRTLNLSRNLVSSLHKHAFKGLTNLLLLDL 151
            .|:::                       .|:..::|..|.|..|.:|::.::||.|:..|..|.|
Mouse    75 KLKYN-----------------------QFKGLNQLTWLYLDHNHISNIDENAFNGIRRLKELIL 116

  Fly   152 SFNRIETVHPTALSDLASLVELDLTNNNIVSLEDNCFKGMNTLEVLVFRNNRLLDVPASNLWHLH 216
            |.|||..........:.:|..|||:.|.:.||....|:|:..|..|..|:|.|..:|........
Mouse   117 SSNRISYFLNNTFRPVTNLRNLDLSYNQLHSLGSEQFRGLRKLLSLHLRSNSLRTIPVRIFQDCR 181

  Fly   217 ALKSLDMSLNLVEFVRNDSFEGLKELLALSVQGNVMSELDLSAFEGLISLKHLDLSDNNLTMVPT 281
            .|:.||:..|.:..:..:.|.|:..|..|.::.|..|:|:|:.|..|:||::|.:..|.::::..
Mouse   182 NLELLDLGYNRIRSLARNVFAGMIRLKELHLEHNQFSKLNLALFPRLVSLQNLYMQWNKISVIGQ 246

  Fly   282 QQLSKLSNLTYLNLGGNRFSQLPAVAFLNLFHLRELHLSRLDFLQRIDSRAFVDNTHLQTLHLNN 346
            ......|:|..|:|.||                              :..||            :
Mouse   247 TMSWTWSSLQRLDLSGN------------------------------EIEAF------------S 269

  Fly   347 NPQLSDIPMRLFQGNPNILEVYMQSNSLQTLYSAQFPVD---QLQKLYLGDNPLQCN---CSLL- 404
            .|.       :||..||:..:.:.||.|  .:..|..:|   .|..:.|..|..:|:   |||: 
Mouse   270 GPS-------VFQCVPNLQRLNLDSNKL--TFIGQEILDSWISLNDISLAGNIWECSRNICSLVN 325

  Fly   405 WLWRLVTGNFEGV 417
            ||     .:|:|:
Mouse   326 WL-----RSFKGL 333

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
FiliNP_001369108.1 LRR 71..>348 CDD:443914 60/276 (22%)
leucine-rich repeat 75..97 CDD:275378 3/21 (14%)
leucine-rich repeat 98..121 CDD:275380 1/22 (5%)
leucine-rich repeat 122..145 CDD:275380 8/22 (36%)
leucine-rich repeat 146..169 CDD:275380 7/22 (32%)
leucine-rich repeat 170..193 CDD:275380 9/22 (41%)
leucine-rich repeat 194..217 CDD:275380 6/22 (27%)
leucine-rich repeat 218..265 CDD:275380 14/46 (30%)
leucine-rich repeat 266..289 CDD:275380 3/22 (14%)
leucine-rich repeat 290..313 CDD:275380 5/22 (23%)
leucine-rich repeat 314..338 CDD:275380 2/23 (9%)
LRR_8 337..397 CDD:404697 13/62 (21%)
leucine-rich repeat 339..360 CDD:275380 2/20 (10%)
Lrrtm3NP_848793.1 LRRNT 33..61 CDD:214470 8/31 (26%)
LRR 59..339 CDD:443914 81/354 (23%)
LRR 1 63..83 4/42 (10%)
leucine-rich repeat 66..86 CDD:275380 4/42 (10%)
LRR 2 86..107 7/20 (35%)
leucine-rich repeat 87..110 CDD:275380 8/22 (36%)
LRR 3 110..131 7/20 (35%)
leucine-rich repeat 111..134 CDD:275380 7/22 (32%)
LRR 4 134..155 8/20 (40%)
leucine-rich repeat 135..158 CDD:275380 9/22 (41%)
LRR 5 158..179 6/20 (30%)
leucine-rich repeat 159..182 CDD:275380 6/22 (27%)
LRR 6 182..203 5/20 (25%)
leucine-rich repeat 183..206 CDD:275380 6/22 (27%)
LRR 7 206..226 6/19 (32%)
leucine-rich repeat 207..230 CDD:275380 8/22 (36%)
LRR 8 230..251 4/20 (20%)
leucine-rich repeat 231..254 CDD:275380 3/22 (14%)
LRR 9 254..275 8/69 (12%)
leucine-rich repeat 255..279 CDD:275380 10/72 (14%)
LRR 10 279..300 5/22 (23%)
leucine-rich repeat 280..300 CDD:275380 4/21 (19%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 378..410
Blue background indicates that the domain is not in the aligned region.

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