DRSC/TRiP Functional Genomics Resources

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Protein Alignment Snoo and SKOR1

DIOPT Version :10

Sequence 1:NP_609164.3 Gene:Snoo / 5740414 FlyBaseID:FBgn0085450 Length:1223 Species:Drosophila melanogaster
Sequence 2:NP_001352844.1 Gene:SKOR1 / 390598 HGNCID:21326 Length:965 Species:Homo sapiens


Alignment Length:1318 Identity:252/1318 - (19%)
Similarity:380/1318 - (28%) Gaps:510/1318 - (38%)


- Green bases have known domain annotations that are detailed below.


  Fly    13 LKKYQTSATKSLQGPG----HALTTAGVLDIVTNGRSESPGLNGKCQASPPVVALIKKEILSSPE 73
            |:.:.:..::|..|.|    .|...:|.::.:|.  ...||..|.                |||.
Human    12 LRIWVSLPSQSENGIGFLAARAFLRSGGMEALTT--QLGPGREGS----------------SSPN 58

  Fly    74 PQDLHHHECSTRGTPPQIYSPATPPRELSQPILSVADAGCGELYETKLEGKTIGCFSVGGEMRLC 138
                     |.:...|...|.|..|.::.               ||.|.|..|....:.|:.|||
Human    59 ---------SKQELQPYSGSSALKPNQVG---------------ETSLYGVPIVSLVIDGQERLC 99

  Fly   139 LPQFLNNVLNDFSLEQINRIFDELGIYCSQCTHDQLVEFKAAKILPSDVKASGLITRTDAERLCA 203
            |.|..|.:|.::|..:|:.....|||.|.|||..||...:.|..:|...:..|:||:.:|||||.
Human   100 LAQISNTLLKNYSYNEIHNRRVALGITCVQCTPVQLEILRRAGAMPISSRRCGMITKREAERLCK 164

  Fly   204 ALL--HRSDRNSYVPIESLAKGALSFHVYHKCFGKCEGICTPDMYSYQKPTCIKCLECDGWFSPQ 266
            :.|  |:..:   :| |:.|     |.|.|:|.....|...|..|:..:..||||..|..:|||.
Human   165 SFLGEHKPPK---LP-ENFA-----FDVVHECAWGSRGSFIPARYNSSRAKCIKCGYCSMYFSPN 220

  Fly   267 KFVGHVHRKFENHTCHWGFDSRNWHDYLHVALDVENREKYQIILDQLKEVELKEMHKAQRELEHK 331
            ||:.|.||.               .|..:...|..|...::      :.::|.: ..|..||.|.
Human   221 KFIFHSHRT---------------PDAKYTQPDAANFNSWR------RHLKLSD-KSATDELSHA 263

  Fly   332 KRKAEMLMDDGML----------GSGPVLGLAGHPHGLVGA-----------LAP---------- 365
            ....:.:.:.|..          |.|...|..|...|..|.           :||          
Human   264 WEDVKAMFNGGTRKRTFSLQGGGGGGANGGSGGQGKGGAGGGGGGGPGCGAEMAPGPPPHKSLRC 328

  Fly   366 -------PPPPPMKQPQMDI--------------PSGKKQLQQLKGATVAASALEYQYQVMYAHC 409
                   ||.||...||..:              |.|        ||.|.:      |.|:    
Human   329 GEDEAAGPPGPPPPHPQRGLGLATGASGPAGPGGPGG--------GAGVRS------YPVI---- 375

  Fly   410 VQKEREREREHLPHSHPLPRQHRAVLVATTP--YPHLPQYPT---------PPTLNSSSAFRPWG 463
                            |:|.:...:|....|  :||...:||         .|.|.:...  ..|
Human   376 ----------------PVPSKGFGLLQKLPPPLFPHPYGFPTAFGLCPKKDDPVLGAGEP--KGG 422

  Fly   464 PDTTKAFLHAYGATLSSLPYACQEPPEL-QNPERVVRSTDKRYAERTYQPNVALAPRKSILSKER 527
            |.|......|.....:..|.|...||.. ..|........       :||:.|.           
Human   423 PGTGSGGGGAGTGGGAGGPGASHLPPGAGAGPGGGAMFWG-------HQPSGAA----------- 469

  Fly   528 DKDRERMEREVMERQRLREKETDHQVVHIKQERSQTPTPPTASPPDGVVLPLDVVEPPHPSSSGS 592
             ||..                   .|.......:..||.|...|..| .||:    |.:|::...
Human   470 -KDAA-------------------AVAAAAAAATVYPTFPMFWPAAG-SLPV----PSYPAAQSQ 509

  Fly   593 NSPLPAHLPAAPATAPPNAGGAPPTPTNLRNMRSPEEFSAGGSNEITSSTS--PHHQQSSHHQVV 655
            ...:.|.:.||.|.|...||...|.|  |......:|...|......|:.|  |..:..:...:.
Human   510 AKAVAAAVAAAAAAAAAAAGSGAPEP--LDGAEPAKESGLGAEERCPSALSRGPLDEDGTDEALP 572

  Fly   656 QPTAGAPPPSQHIIATVNQHAKLLPSSSSLPNGNGSSSLAATNNEPSRIRINKNLMSQQPVV--- 717
            .|.|..|||                                   .|...|....:.:.:|||   
Human   573 PPLAPLPPP-----------------------------------PPPPARKGSYVSAFRPVVKDT 602

  Fly   718 -AVSGMTPHHHQHHPTHMHHFSHGYYKSQASSPTQSSSAGLNLSTHSSNVVSSPHHATQPKTHHS 781
             :::.:.....:           .|....|..|...:.:|..:|....:..||.:::..|     
Human   603 ESIAKLYGSARE-----------AYGAGPARGPGPGAGSGGYVSPDFLSEGSSSYNSASP----- 651

  Fly   782 SVGSGNHGLQNGKPHLGSEFELSTDTDDTDSLNGEPDSSAMLPPWEQAVESLRETRPKDRERVLL 846
                                    |.|..|    ||:                            
Human   652 ------------------------DVDTAD----EPE---------------------------- 660

  Fly   847 ILQRLLQENDQYRYNNIQLSELLHKQDAHIADLTEQLQRYRRQFEEQVCKVDLRKMPFKHQTRLE 911
                                                              ||             
Human   661 --------------------------------------------------VD------------- 662

  Fly   912 NVVEAGRGEAEEDEELEEDEMEDRANNNNQQELSPLIKAPANG----LRRSVTPPNCCAS-EGGD 971
              ||:.|...:||.               |:|..|  .||:.|    ..:...||:..:| ..|.
Human   663 --VESNRFPDDEDA---------------QEETEP--SAPSAGGGPDGEQPTGPPSATSSGADGP 708

  Fly   972 CEKPD--EPESKRIKLQVGE-----------KAEDKQVENEESPSNGTESHDLEK---------- 1013
            ...||  .|..:|   ::|.           .|||.....|.||.:|...::|.:          
Human   709 ANSPDGGSPRPRR---RLGPPPAGRPAFGDLAAEDLVRRPERSPPSGGGGYELREPCGPLGGPAP 770

  Fly  1014 ----LEKNDDKTDPTNNPKSPQPSQISSDDEMEEDDEDEDEEDEDEEVQVEAPHSSALATPPTAT 1074
                ..:.|:..........|..|.:.:.:..|.|.||.....:|.|.:...|...:::.|..|.
Human   771 AKVFAPERDEHVKSAAVALGPAASYVCTPEAHEPDKEDNHSPADDLETRKSYPDQRSISQPSPAN 835

  Fly  1075 TPLSPDSAATAGQLFDSSNSSDESSMKKAQMSACHALEKMSSNVGSDENNQRLAE---------- 1129
            |....|     |...|              ::..|.:||...|:..:|..:.|.|          
Human   836 TDRGED-----GLTLD--------------VTGTHLVEKDIENLAREELQKLLLEQMELRKKLER 881

  Fly  1130 --ESQEDEAEEDPEEEDSDDDEMPLQQRQ-----------QQQRQRVAPQNVLSGPSVAGHH--- 1178
              :|.:|..::..:.|.:..:|| :||.|           |:::.|.|.|..|.....|.||   
Human   882 EFQSLKDNFQDQMKRELAYREEM-VQQLQIVRDTLCNELDQERKARYAIQQKLKEAHDALHHFSC 945

  Fly  1179 --PAPAH--------PPM 1186
              ..|.|        ||:
Human   946 KMLTPRHCTGNCSFKPPL 963

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SnooNP_609164.3 DHD_Ski_Sno 116..206 CDD:410782 34/89 (38%)
c-SKI_SMAD_bind 226..317 CDD:198114 23/90 (26%)
AF-4 637..>789 CDD:461550 21/157 (13%)
SKOR1NP_001352844.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 45..72 9/53 (17%)
DHD_Skor 77..167 CDD:410783 34/104 (33%)
c-SKI_SMAD_bind 180..272 CDD:198114 29/118 (25%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 278..367 16/96 (17%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 410..458 11/49 (22%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 530..592 15/98 (15%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 615..777 43/307 (14%)
PRK07764 <659..846 CDD:236090 46/304 (15%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 796..843 11/51 (22%)
OmpH 861..>936 CDD:461098 16/75 (21%)

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