DRSC - DRSC Integrative Ortholog Prediction Tool

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits

Protein Alignment CG34274 and Sugt1

DIOPT Version :9

Sequence 1:	NP_001097807.1	Gene:	CG34274 / 5740212	FlyBaseID:	FBgn0085303	Length:	250	Species:	Drosophila melanogaster
Sequence 2:	NP_001013069.1	Gene:	Sugt1 / 290408	RGDID:	1307550	Length:	336	Species:	Rattus norvegicus

Alignment Length:	107	Identity:	23/107 - (21%)
Similarity:	38/107 - (35%)	Gaps:	25/107 - (23%)

- Green bases have known domain annotations that are detailed below.

  Fly   152 AKDYYSKGIQYIKDSPVLYVNRALCFIKLREFKLGIID--------------------CDYVLAK 196
            |.:..:|.::...|....|..||.|.|.|.::..||.|                    |:|
  Rat    30 ALEELTKALEQNPDDAQYYCQRAYCHILLGKYCDGIADVKKSLELNPNNSTALLRKGICEY---- 90

  Fly   197 IDEHYLRAWLYRAAAYKRLNDEPNFEYSVDRARRF-NRSDAD 237
            .::.|..|....|...|....:.||:..:.|.:.. |.|:.:
  Rat    91 YEKDYASALETFAEGQKLDGTDTNFDIWIKRCQEIQNGSEPE 132

Known Domains:

Indicated by green bases in alignment.

Gene	Sequence	Domain	Region	External ID	Identity
CG34274	NP_001097807.1	TPR_11	133..195	CDD:290150	14/62 (23%)
		TPR repeat	133..161	CDD:276809	2/8 (25%)
		TPR repeat	166..197	CDD:276809	11/50 (22%)
Sugt1	NP_001013069.1	TPR 1	11..44		2/13 (15%)
		PLN03088	21..336	CDD:215568	23/107 (21%)
		TPR repeat	44..74	CDD:276809	9/29 (31%)
		TPR 2	45..78		9/32 (28%)
		TPR	45..78	CDD:197478	9/32 (28%)
		TPR 3	79..112		6/36 (17%)
		TPR repeat	79..107	CDD:276809	5/31 (16%)
		p23_CS_hSgt1_like	146..229	CDD:107239
		SGS	256..336	CDD:282811
Blue background indicates that the domain is not in the aligned region.

Information from Original Tools:

Tool	Simple Score	Weighted Score	Original Tool Information
Tool	Simple Score	Weighted Score	BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E2759_KOG0548
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	1	0.900